Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01749 ATGCCGCCGGCGAAGAAGGGAAAAGCAAAGGTGGAGCCTAGGGTAGCGCCGCCGCCGGAGAAATCTAACGATTTTCCGTCTTGTATTCGCTGTGTGCCTCCTTCCTCCGTCGCCGTAACCATCCACGCCAAACCTGGTTCCAAATCCGCATCCGTAACCGATATTAGCGATGAAGCGGTGGGAGTGCAAATTGACGCACCTGCGAGGGACGGCGAAGCAAATGCGGCTCTTCTCGATTTCATCAGCTCTGTTTTAGGTGTTAAACGAAGACAAGTCTCCATAGGCACAGGTTGTAAGTCGAGAGATAAGACTGTCATCGTGGAAGATGTAACTCAGCAATATGTTTTTGATGCTTTGGATAAAGCCTCGAAGCAGTAG 378 0.5079 MPPAKKGKAKVEPRVAPPPEKSNDFPSCIRCVPPSSVAVTIHAKPGSKSASVTDISDEAVGVQIDAPARDGEANAALLDFISSVLGVKRRQVSIGTGCKSRDKTVIVEDVTQQYVFDALDKASKQ 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01749 125 SUPERFAMILY YggU-like 27 113 IPR036591 -
Spst9g01749 125 Hamap UPF0235 protein YggU [yggU]. 33 121 IPR003746 -
Spst9g01749 125 MobiDBLite consensus disorder prediction 1 27 - -
Spst9g01749 125 NCBIfam DUF167 family protein 38 106 IPR003746 -
Spst9g01749 125 PANTHER OS04G0686300 PROTEIN 1 124 - -
Spst9g01749 125 Pfam Uncharacterised ACR, YggU family COG1872 37 108 IPR003746 -
Spst9g01749 125 Gene3D - 29 124 IPR036591 -
Spst9g01749 125 SMART DUF167_2 33 109 IPR003746 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01749 K09131 - gmx:100527290 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01749 9 19353222 19353985 Spst9g01749 9 19353222 19353985 ECH