Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01665 ATGTATCAGCAGTGGGTTGTAATTCCCCACCAACAGGAAGCCATGTCAAGCCCCTCTCTTTTCGAACCGGAAACAGAGACACCGACACCACCCAACAACCTCATCCCCTCCCTCCCAGACGACGTCGCTTTGAACTGCATAGCACGCATCCCTCGCTGCCACCACCCAACCCTATCCCTCGTTTCCAAACCCATCCGCACCCTCCTCTCTTCCCCTCTCTTATTCACCACCCGCTCGCTCCTCAACTGCACGCAATCCCTCCTCTACCTCACTCTCCGCTCACGCGCCTCCTCCCTTCAGTGGTTCACGCTCCACCGCACAGTCCCTAGCCCCCTCCTCGCGCCCCTCCCCCCGATTCCCTCCCCAGCCGTGGGCTCCGCTTACGCCGTCCTCGGCTCCACCATCTACGTCCTCGGCGGCTCCATCAACGACGTCCCCTCTCCCCACGTCTGGCTCCTTGACTGCCGCTTCCACCGCTGGCTCCCGGGCCCTCCCATGCGCGTCGCCCGCGAGTTCGCTGCCGCGGGAGTTCTCGACGGAAAGATCTACGTCATCGGCGGCTGCGTCGCCGACACGTGGGCCCGCTCAGCCAATTGGGCGGAGGTCCTGGACCCGGACGCGGGGCGCTGGGAGAGGGTGGCCAGTCCCGCTGAAGTCCGGGAGAAATGGATGCATGCCAGCGCTGTCGTCGGCGACAGGGTGTACGCGATGGCGGATCGCGGCGGCATCGTGTACGAGCCGCGCAGCGGATCGTGGGAGAGCGTGGGCGGTGAATTGGATAACGGGTGGAGGGGGAGGGCGTGCGTGGTGGAGGGGATTTTGTACTGCTACGACTATTTGGGAAAAATCAAAGGGTTCGACGTCGGGCGCGGTGTGTGGGAGGAGTTGAAGGGGTTGGAGAAGGGTTTGCCCAGGTTCCTGTGTGGGGCCACCATGGCTGATTTGGGTGGGAAATTGTGTGTGGTGTGGGAGTGCCAAGGGAATGGGAAAGATATGGAGATTTGGTGCGCTGAGATTGGAGTGAAGAAGAATTCAAACGGGGAATTGAGGGGTCAACTTGGATGGATTGGGAAGGTTCTCTCTGTTCCCAAAGGCTCTTCAGTTGTGCATTTATCTTCTGTTGCCTTGTGA 1131 0.6101 MYQQWVVIPHQQEAMSSPSLFEPETETPTPPNNLIPSLPDDVALNCIARIPRCHHPTLSLVSKPIRTLLSSPLLFTTRSLLNCTQSLLYLTLRSRASSLQWFTLHRTVPSPLLAPLPPIPSPAVGSAYAVLGSTIYVLGGSINDVPSPHVWLLDCRFHRWLPGPPMRVAREFAAAGVLDGKIYVIGGCVADTWARSANWAEVLDPDAGRWERVASPAEVREKWMHASAVVGDRVYAMADRGGIVYEPRSGSWESVGGELDNGWRGRACVVEGILYCYDYLGKIKGFDVGRGVWEELKGLEKGLPRFLCGATMADLGGKLCVVWECQGNGKDMEIWCAEIGVKKNSNGELRGQLGWIGKVLSVPKGSSVVHLSSVAL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01665 376 SUPERFAMILY Kelch motif 110 343 IPR015915 GO:0005515
Spst9g01665 376 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 25 359 - -
Spst9g01665 376 Gene3D - 81 348 IPR015915 GO:0005515
Spst9g01665 376 Pfam Kelch motif 170 215 IPR006652 GO:0005515
Spst9g01665 376 Pfam Kelch motif 123 167 IPR006652 GO:0005515
Spst9g01665 376 SMART kelc_smart 181 233 IPR006652 GO:0005515
Spst9g01665 376 SMART kelc_smart 134 180 IPR006652 GO:0005515
Spst9g01665 376 CDD F-box_AtAFR-like 34 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01665 Spst-Chr9 16911454 16912584 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01665 26 360 Miscellaneous Gene Families AT4G33900 38.017 3.02e-61 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01665 - - gmx:100798508 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01665 9 16911454 16912584 Spst9g01665 9 16911454 16912584 ECH