Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01658 ATGGGTGAAGATATCCCGCGAGTTGGTGGGTTTTCGGCTGGGCTGGCTGTGATATTGAACGGTGAGGACGGCAAGAAAAATTTGCCAAAAACTCGGCTTCTTTCTTGCTGTGACGATTTGGGTCAGCAATCGGTGGAGCGAACCCTTGAGTACGTGTTTGGCCTCCGAAACAGATCGCTCAATTCATTGACTGGTCGGGTTGATCGTGGTTTTATACACTCTGTCATTAGAAATGATTTCTCAAGATATATTGTGAAATTTAATGATTCGTATAGTGAAAGTGATGGGATTTGTTATATTAATGGTAAAAATGGCAACGGGCCTGATATTATAGGCCTAGAAGTATCCAGCATCTGTGGTGATATTAAAGTCATCAAGTCACCTTTTCTTATAGAGAGCATGGCGATGTTTAGTAGTGCCAGGGCTAGTGCTTGTGTTTGGAAGGGAAAATGGATGTATGAGGTTATGTTGGAAACATCTGGCATACAGCAACTTGGTTGGGCCACTCTTTCTTGCCCTTTTACTGACCATAAAGGTGTTGGCGATGCTGATGATTCATATGCTTATGATGGGAGGCGAGTTAGCAAGTGGAACAAGGATGATGAGACATATGGCGAGTCATGGGTTGTTGGTGATATTATTGGATGTTGTATAGACTTAGATCGAGATGAAATATTATTCTACAGGAATGGTAATTCACTTGGGGTGGCATTCCAAGGAATTCGAAAAATGGGTCCAGGTTTTGGTTACTATCCAGCAGTTTCTCTATCCCAGGGTGAAAGATGTGAGTTAAACTTTGGAGCTCGACCCTTTAAGTATCCAATTGTAGGCTACCTTCCTCTTCAGGCTCCTCCCTCTAAGAACTACTATGTCACCCAATTACTGCAATGCTGGTCAAGATTGTTGGACATGCATTCAGTAGAACGAGCTGATCATTCCTTAGCTCAGAAATTGAGAAGGGTGAAGAGATTTGATTCATTGGAAGAAATTTTCCATCCTGCTTCTTATGCTATATGTGAGGAATTATTCTCTATACTTGAAGCCGATGTTGGGACCACAGAGTATATGGTTTGGGGTCCACTGTTGTCTTTCATGTTTGAAGTTTTTGGTTTGCATGCACCCCATGATTACTCAAGCTTGGATAAAGTAGTTGAGGTTATGCTGCAATTTCAAGGATCCCATGTGCTATTTGAACACATCCTAAATGCTCTTTCCTGTGGTTGTAAAATAGCCTTATTAATTTTAACTGAATGTCCTTATTCTGGATCATATTCTCACCTTGCATTGGCATGTCATCTTCTAAGACGAGAAGAACTTATGGTGCTTTGGTGGAAGTCACCAGATTTTGAATTCTTGTTTGAAGGTTTTCTGTCACAAAAGACTCCAAACAAACAGGATCTTGACTCCATGATACCAACTGTTTGGTGGCCTGGTTCTTGTGAGGATGCATCTTATGAAGGTAACATGATGTTGACAACCACAGCTTTATCTGAATCAGTCAGCAAGATTGAGGAGAAGCATAGGGACCTTTGTCGTTTAGTGATACAATTTATACCACCTACGAATCCTCCCCAGCTACCTGGAGCAGTATTTAGGACATTTTTACAGAGCCTTCTACTGAAGAACAGAGGAGCAGAACGGAATATTCCACCCCCTGGTGTTTCTAGCAACTCAGTTCTTGTTTCAATTTACACAGTTGTACTCCATTTTCTATCTGAAGGATTTGCCTTGGGTGACATCTGTGGCTGGTTAAAGAGCTGCAAAGCAGATGGTGGTTTCCTTCATAGAGGTGGTGAACAAAGCTTTCCTGTTCATTTATTTCTTAAAAGTGATCCCCATAGGGTTGATATCTCCAGGCTTGGGGGATCCTATAACCATTTATCAAAGCTGCACCCTACATTTGATCATGAAATGGAAGTAATTCAATGGGATGAAGGTTGCATGGATAGTGAAGAAACCAGGGTTACTCATTCAACCAGGCAAAAGCCATGCTGTTGTTCTAGTTATGATTCTGATTTTACAAGGAACTTCAAGGTTCCTGCTAAATACCTGGCCAAAGGTTCTCGTGGTCATTGTAGCTCTATTCCAGAAAGACCAGCTCATGTCACTGCTGAATGCAGTGATGGGAGTCTGAATGATGAGATAACTGATAAACCTAGCTCCAGTGATCAATCTGAACCTGAATATGGTTACCGCCAAGTGCACCATATGAAGCCTGTACCAAAGGATACTAATATCTCTACAGCTACACTACGAGAAGAAGAGCTACTTGATGATTTGCTATGGTTGTATCATGTCGGTCTTGCTCCAAATTTTAAGCAGGCATCATACTACATGACTCATCAGACACAGTCAATTTCCCTTTTGGAGGAAACTGATAAGCAAATAAGAGATCGAGCTTGCGGTGAGCAATTGAAGCATTTAAAAGAAGCTCGTAATGAGTATAGAGAAGAGGTTATTGATTGTGTTAGGCATTGTGCTTGGTACCGCATCTCTCTATTTTCTCGGTGGAAACAGAGAGGAATGTATGCAATGTGCATGTGGGTTGTCCAGTTGCTACTGGTTCTGAGCAATATGGATTCAGTGTTTATATACATCCCTGAATATTATCTTGAAGCGTTGGTTGATTGCTTTCATGTGTTGCGGAAAAGTGATCCTCCCTTTGTTCCATCCACAATTTTCATCAAGAGAGGACTTACTTCATTTGTCACCTTTGTAGTTACTCATTTCAATGATCCGAGAATATCAAGTGCAGATCTTAGGGATCTTCTTCTTCAGTCTATATCTGTCCTGGTCCAGTACAGGGAATATTTGGCTACCTTTGAGAGCAATGAAGCAGCAACCCAAAGGATGCCGAAAGCTTTACTATCAGCATTTGATAACAGATCTTGGATTCCCGTGACAAACATACTCTTACGGTTATGCAAGGGTTCTGGTTTTAGTTTTTCGAAGAATGGAGAATCCTCTTCGTCATCGGTCCTTTTCCAAAGGTTGCTAAGGGAAGCTTGCATAAGCGATGAAGGATTGTTTTCATCTTTTCTAAACCGAGTGTTCAATACACTAAGCTGGACCATGACTGAATTTTCAGTTTCTCTTCGTGAAATGCAAGAAAAGTACCAGGTAATAGAGTTTCAGCAAAGGAAATGTTGTGTGATATTTGATCTTTCATGTAATCTTGCACGGATTCTGGAATTCTGCACTCGTGAGATTCCTCAAGCATTCCTGTCTGGACCAAACACTAACCTTCGAAGGTTAACCGAATTGGTTGTGTTTATCCTAAATCACATTACTTCTGCAGCCGATGCTGAATTCTTTGACTTGACCACCCTTAGACGGCATAGCCAATCTCCAGAAAAAATTAACCGAGGCATGATATTGGCACCTCTAGTAGGGATCATCTTAAATTTATTGGATGCTATAAATTCGGAAGATTATCAAGAAAACAATGATCTTTTAGATATTTTTGCAAGCATGGACTGTTCAGATACTGTTCAATATGGATTCCAGTATCTTCTGGATTATAACTGGGATGGATCTTTCCGAGGGGAAGCTTATGTGGCAAAATATGAGCAGCTAGAGAATTTTCTTAGTCTCCTTACTTGCCGCACCGTATTACAAGATGATAAAGTGGACAGTGCACCTCTTGAATTGCCAGAGATGTTTCTTTTGCAACGCAACAGTGACAAGTGTTATCAAAATTTGATAGAAGACGACTGGCTAGGGAGCTTCTATTTTGGTTGCTTGGTTCCTGATGGAATTTAG 3762 0.4104 MGEDIPRVGGFSAGLAVILNGEDGKKNLPKTRLLSCCDDLGQQSVERTLEYVFGLRNRSLNSLTGRVDRGFIHSVIRNDFSRYIVKFNDSYSESDGICYINGKNGNGPDIIGLEVSSICGDIKVIKSPFLIESMAMFSSARASACVWKGKWMYEVMLETSGIQQLGWATLSCPFTDHKGVGDADDSYAYDGRRVSKWNKDDETYGESWVVGDIIGCCIDLDRDEILFYRNGNSLGVAFQGIRKMGPGFGYYPAVSLSQGERCELNFGARPFKYPIVGYLPLQAPPSKNYYVTQLLQCWSRLLDMHSVERADHSLAQKLRRVKRFDSLEEIFHPASYAICEELFSILEADVGTTEYMVWGPLLSFMFEVFGLHAPHDYSSLDKVVEVMLQFQGSHVLFEHILNALSCGCKIALLILTECPYSGSYSHLALACHLLRREELMVLWWKSPDFEFLFEGFLSQKTPNKQDLDSMIPTVWWPGSCEDASYEGNMMLTTTALSESVSKIEEKHRDLCRLVIQFIPPTNPPQLPGAVFRTFLQSLLLKNRGAERNIPPPGVSSNSVLVSIYTVVLHFLSEGFALGDICGWLKSCKADGGFLHRGGEQSFPVHLFLKSDPHRVDISRLGGSYNHLSKLHPTFDHEMEVIQWDEGCMDSEETRVTHSTRQKPCCCSSYDSDFTRNFKVPAKYLAKGSRGHCSSIPERPAHVTAECSDGSLNDEITDKPSSSDQSEPEYGYRQVHHMKPVPKDTNISTATLREEELLDDLLWLYHVGLAPNFKQASYYMTHQTQSISLLEETDKQIRDRACGEQLKHLKEARNEYREEVIDCVRHCAWYRISLFSRWKQRGMYAMCMWVVQLLLVLSNMDSVFIYIPEYYLEALVDCFHVLRKSDPPFVPSTIFIKRGLTSFVTFVVTHFNDPRISSADLRDLLLQSISVLVQYREYLATFESNEAATQRMPKALLSAFDNRSWIPVTNILLRLCKGSGFSFSKNGESSSSSVLFQRLLREACISDEGLFSSFLNRVFNTLSWTMTEFSVSLREMQEKYQVIEFQQRKCCVIFDLSCNLARILEFCTREIPQAFLSGPNTNLRRLTELVVFILNHITSAADAEFFDLTTLRRHSQSPEKINRGMILAPLVGIILNLLDAINSEDYQENNDLLDIFASMDCSDTVQYGFQYLLDYNWDGSFRGEAYVAKYEQLENFLSLLTCRTVLQDDKVDSAPLELPEMFLLQRNSDKCYQNLIEDDWLGSFYFGCLVPDGI 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01658 1253 SMART SPRY_3 148 270 IPR003877 GO:0005515
Spst9g01658 1253 Pfam Ubiquitin elongating factor core 769 959 IPR019474 GO:0000151|GO:0006511|GO:0016567|GO:0034450
Spst9g01658 1253 MobiDBLite consensus disorder prediction 709 728 - -
Spst9g01658 1253 CDD SPRY_RNF123 139 267 IPR035773 -
Spst9g01658 1253 FunFam E3 ubiquitin-protein ligase RKP 120 294 - -
Spst9g01658 1253 SUPERFAMILY Concanavalin A-like lectins/glucanases 118 274 IPR013320 -
Spst9g01658 1253 PANTHER RING FINGER AND SRY DOMAIN-CONTAINING 108 1112 IPR045129 GO:0004842
Spst9g01658 1253 MobiDBLite consensus disorder prediction 705 732 - -
Spst9g01658 1253 Gene3D - 122 299 IPR043136 -
Spst9g01658 1253 ProSiteProfiles B30.2/SPRY domain profile. 79 271 IPR001870 -
Spst9g01658 1253 Pfam SPRY domain 150 268 IPR003877 GO:0005515
Spst9g01658 1253 Pfam E3 ubiquitin-protein ligase RKP N-terminus 1 139 IPR045737 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01658 K12169 - gmx:100800617 2280.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01658 9 16779320 16793630 Spst9g01658 9 16779320 16793630 ECH