Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01638 ATGGCTGCGCGAGCCCTATTGACCAGAAAAACCCTAGCCTCGGTGCTTCGCAACGACGCCAAGCCTCTCGGAGTTGGCATAGCTGCGGCTACTCATTCCCGCGGCTTGCATGTCTACACGCTACCTGATCTGGACTACGACTATGGCGCGCTGGAGCCAGCCATTAACGGCGAAATCATGCAGCTCCACCATCAGAAGCACCATCAGACTTACATCACCAACTACAACAAGGCCCTCGAGCAGCTCCAAGATGCCGTCGCCAAGGCCGATTCCCCTGCCAGCGTTAAGCTCCAGGCCGCCATCAAGTTCAATGGCGGAGGACATATCAACCATTCTATTTTCTGGAAAAATCTAGCTCCTGTTCGTGAAGGAGGTGGCGAGCCACCCAAGGGTTCACTGGGATGGGCTATTGACACTCATTTTGGCTCTTTTGAAGCATTGATACAAAAGGTTAATGCAGAAGGTGCAGCACTGCAGGGGTCTGGATGGGTGTGGCTTGGTCTGGACAAAGAGTTGAAGAGGCTTGTTGTTGAAACCACCGCTAACCAGGACCCACTGGTTACTAAGGGACCAAGCTTGGTTCCGTTGCTTGGTATTGATGTTTGGGAGCACGCGTACTACTTACAGTTTTCAAATGTCTAA 642 0.5234 MAARALLTRKTLASVLRNDAKPLGVGIAAATHSRGLHVYTLPDLDYDYGALEPAINGEIMQLHHQKHHQTYITNYNKALEQLQDAVAKADSPASVKLQAAIKFNGGGHINHSIFWKNLAPVREGGGEPPKGSLGWAIDTHFGSFEALIQKVNAEGAALQGSGWVWLGLDKELKRLVVETTANQDPLVTKGPSLVPLLGIDVWEHAYYLQFSNV 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01638 213 Gene3D - 120 213 IPR036314 -
Spst9g01638 213 ProSitePatterns Manganese and iron superoxide dismutases signature. 200 207 IPR019833 GO:0004784|GO:0006801|GO:0046872
Spst9g01638 213 PRINTS Manganese superoxide dismutase signature 198 210 IPR001189 GO:0004784|GO:0006801|GO:0046872
Spst9g01638 213 PRINTS Manganese superoxide dismutase signature 42 53 IPR001189 GO:0004784|GO:0006801|GO:0046872
Spst9g01638 213 PRINTS Manganese superoxide dismutase signature 102 115 IPR001189 GO:0004784|GO:0006801|GO:0046872
Spst9g01638 213 PRINTS Manganese superoxide dismutase signature 63 76 IPR001189 GO:0004784|GO:0006801|GO:0046872
Spst9g01638 213 PRINTS Manganese superoxide dismutase signature 158 166 IPR001189 GO:0004784|GO:0006801|GO:0046872
Spst9g01638 213 Pfam Iron/manganese superoxide dismutases, C-terminal domain 129 212 IPR019832 GO:0004784|GO:0006801|GO:0046872
Spst9g01638 213 SUPERFAMILY Fe,Mn superoxide dismutase (SOD), N-terminal domain 36 120 IPR036324 -
Spst9g01638 213 Gene3D Fe,Mn superoxide dismutase (SOD) domain 56 119 IPR036324 -
Spst9g01638 213 PANTHER SUPEROXIDE DISMUTASE 2 32 213 - -
Spst9g01638 213 SUPERFAMILY Fe,Mn superoxide dismutase (SOD), C-terminal domain 123 212 IPR036314 -
Spst9g01638 213 FunFam Superoxide dismutase 56 119 - -
Spst9g01638 213 PIRSF MnSOD_FeSOD 17 213 IPR001189 GO:0004784|GO:0006801|GO:0046872
Spst9g01638 213 Pfam Iron/manganese superoxide dismutases, alpha-hairpin domain 39 119 IPR019831 GO:0004784|GO:0006801|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01638 Spst-Chr9 16564349 16567742 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01638 K04564 - gmx:100101896 407.527