Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01551 ATGGCCACTCTCTTTAATTTTCACACCACCCTTCGCCCCTCTTGCTATCTGCCCTTGTCACCCTCACCCTCCTCGCCTTCTCTGCTACCTACATCCCACTTCTCCAAGACCCTCCTCTCGACAACTTTCTTGGGTCACACCGAAATCCTCAAATATGCTGCCACTTCCACAAGCAACCGTGACCGTTCACTCTCTGCTCGCATGTCATGGGACGGTCCTCTCTCTTCCGTCAAATTGATCATTCAGGGTAAAAATCTACAGCTCCCTGATGCAGTGAAGCAGCATGTGGAAGATAAAGTGGGAAAGGCGGTTCAGAAGCATAGTCACCTAGTGAGAGAGGTTGATGTGAGGCTTTCTATTAGAGGAGGAGGTGAATTTGGGCGAGGACCTAGAACTCGTAGGTGTGAGGTGACTTTGTTCACAAAGAGGCACGGAGTGTTGAGGGCTGAGGAGGACGCTGAAAGCACCTATGGAAGTATAGATTTGGTATCATCAATCATTCAGAGGAAGCTGAGGAAAATAAAGGAAAAGGAGTCAGATCATGGTCGCCACATGAAGGGTTTCAATAGGTTGAAGGTTAGGGAGCCGGTGGAGCAATTACCTGTGGCAGAGGATGAAATGTTATCTCCAGAGCAGGAGGAAGAATCAATCGATGAGGTTGTTCGCACAAAGTACTTTGACATGCCACCCTTGACTGTGTCTGAAGCTATTGAGCAACTTGTAAATGTTGATCATGACTTTTATGGTTTTCGAAACGAAGAAACTGGGCAAATTAATATTGTGTACAAAAGAAAAGAAGGTGGATATGGACTCATTATACCCAAAGGTGATGGCGAAGCAGAGAATTCGGAGCCTGTTGTGCTTGAACCAGCTGTAGAATCCTCCCTGAAAGAATGA 897 0.4671 MATLFNFHTTLRPSCYLPLSPSPSSPSLLPTSHFSKTLLSTTFLGHTEILKYAATSTSNRDRSLSARMSWDGPLSSVKLIIQGKNLQLPDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVLRAEEDAESTYGSIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVREPVEQLPVAEDEMLSPEQEEESIDEVVRTKYFDMPPLTVSEAIEQLVNVDHDFYGFRNEETGQINIVYKRKEGGYGLIIPKGDGEAENSEPVVLEPAVESSLKE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01551 298 PANTHER 30S RIBOSOMAL PROTEIN 63 283 - -
Spst9g01551 298 FunFam ribosome-binding factor PSRP1, chloroplastic 230 281 - -
Spst9g01551 298 MobiDBLite consensus disorder prediction 275 298 - -
Spst9g01551 298 Hamap Ribosome hibernation promoting factor [hpf]. 77 275 IPR034694 -
Spst9g01551 298 Pfam Sigma 54 modulation protein / S30EA ribosomal protein 80 177 IPR003489 GO:0044238
Spst9g01551 298 NCBIfam ribosome-associated translation inhibitor RaiA 78 182 IPR003489 GO:0044238
Spst9g01551 298 Gene3D - 230 279 IPR038416 -
Spst9g01551 298 FunFam Ribosome-binding factor PSRP1, chloroplastic 79 182 - -
Spst9g01551 298 SUPERFAMILY Ribosome binding protein Y (YfiA homologue) 78 184 IPR036567 -
Spst9g01551 298 Pfam Sigma 54 modulation/S30EA ribosomal protein C terminus 218 271 IPR032528 -
Spst9g01551 298 CDD RaiA 78 177 IPR003489 GO:0044238
Spst9g01551 298 Gene3D - 78 182 IPR036567 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01551 - - gmx:100803327 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01551 9 15711468 15713208 Spst9g01551 9 15711468 15713208 ECH