Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01533 ATGGCTCAACTACTATCAACTTCATCACTTGTACTGTCACCAAAAACAAGGTACTCTGTTACGCCACAGAACAATGTTGTTGCCCCTTGCATGGCCTCTTTTCCGTCGAGGAAAGAGTTTCCTAGGCTACAAAGGGTGAGAGCGAAGGCTTCTGGTGATAACAAAGACCACTCTGTGGAAGTACAACATGTTAACAAGGGCGACCAAGGGACGGCGGTTGAGAGGAAGCCACGTAGAACGGCCTTCGACATTTCACCCTTTGGTCTTTTGGACCCGTGGTCACCCATGAGGAGCATGCGCCAGATTTTGGATACAATGGACCGAATTTTTGAAGATACCATGACATTTCCCGGAAGAAACGCGGGAGGAGGGGAGATTCGTGCCCCTTGGGATATCAAAGATGAAGAACATGAGATCAGAATGAGGTTTGACATGCCGGGTCTCTCCAAGGAAAATGTTAAGGTATCAGTGGAGGACGATGTGCTTGTCATTAAAGGTGGCCACAAGAGTGAACAAGAACAAGGTGGTGATGATTCTTGGTCGAGCAGGAGCTATAGTTCCTACGACACCCGTTTGAAGCTTCCAGATAACTGCGAGAAGGACAAAGTCAAGGCAGAGTTGAAAAATGGTGTGCTTTATATCACCATTCCTAAGACCCAAATCGAACGCAAGGTTATTGATGTGGAAATTCAGTGA 696 0.4698 MAQLLSTSSLVLSPKTRYSVTPQNNVVAPCMASFPSRKEFPRLQRVRAKASGDNKDHSVEVQHVNKGDQGTAVERKPRRTAFDISPFGLLDPWSPMRSMRQILDTMDRIFEDTMTFPGRNAGGGEIRAPWDIKDEEHEIRMRFDMPGLSKENVKVSVEDDVLVIKGGHKSEQEQGGDDSWSSRSYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPKTQIERKVIDVEIQ 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01533 231 Pfam Hsp20/alpha crystallin family 131 231 IPR002068 -
Spst9g01533 231 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 2 231 IPR044587 GO:0009408
Spst9g01533 231 CDD ACD_sHsps-like 131 218 - -
Spst9g01533 231 FunFam 26.5 kDa heat shock protein, mitochondrial 88 230 - -
Spst9g01533 231 Gene3D - 89 231 IPR008978 -
Spst9g01533 231 MobiDBLite consensus disorder prediction 165 184 - -
Spst9g01533 231 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 121 231 IPR002068 -
Spst9g01533 231 SUPERFAMILY HSP20-like chaperones 107 229 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01533 Spst-Chr9 15523626 15525135 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01533 K13993 - gmx:548078 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01533 9 15523626 15525135 Spst9g01533 9 15523626 15525135 ECH