Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01475 ATGGACTCTCTGCAACTCCATCCTCTTCTACTTCTGCATCCACGTGCATCATCACCATCAATAAGGCAACTGCGTTTCCCTTCTCCGTTAATACTAAACTTTAGAAATGTCAACTTGCGATCGTTTTCTGCTCACGCTGGTGACGCTGCTTCACACGACGGGCCCTTCGCTTTCGAAGAAAAAATTATCTCGCACCCCAAAGACGATAGGGCTCTCGTGCTGGCCAGAGAAACCGACGATTTTGGCTATCTCGTTGGCTTTCGCTTGATTCCCGAGTCTGGTCTTGAAGAGTTTATGAGTGTGCCACACGCAATAGCAAGTAGCGGTGAGGTTGAAAAACCTGGGATTGCGGTTACAGATGAAGCGGAAGCTAAGACTAGAGTGTCCCACAACATTTGTTTTGTGACTGCTGAAGCTGCGCCATATTCCAAGACCGGTGGTCTCGCTGATGTTTGTGGCTCTTTGCCAATAGCTCTGGCGGCTCGCGGGCACCGTGTGATGGTTGTCACGCCAAGATACATTCATGGTACTGCTGAGGATGATAAGTTTGCTGGGGCAGTTGATCTGGACCGATGCACCAAAGTGATGTGCTTTGGAGGTGCTCAAGAAGTTGGCTTTTTCCATGAGTTTAGGGAAGGGGTTGATTGGGTATTTGTGGACCACCCCTCGTTTCATAGACCAGGGAATCCGTATGGAGACAAGTTTGGTACTTTTGGGGATAATCAGTTTCGGTTCACTTTACTTTCCCATGCAGCATGTGAAGCACCATTGGTGCTTTCATTGGGGGGGTTCACATACGGAGAAAAATGTTTATTCCTTGCTAATGATTGGCATGCCAGCCTAGTTCCAGTACTTTTGGCAGCCAAGTATCGTCCACATGGAGTATATAAGGATGCACGCAGTATATTAGTGATACATAATATAGCACATCAGGGAGTGGAACCTGCAATCACATATGCTAATTTGGGGCTACCTCCAGAATGGTATGGAGCATTAGGATGGGTGTTCCCAACGTGGGCAAGGACGCATGCTCTTGATACAGGTGAAGCTGTCAACTTTCTAAAAGGTGCCATTGTTACAGCTGACCGTATTGTGACAGGCTATTCCTGGGAGATAACGACTAGTGAAGGTGGATATGGTCTACATGAATTATTAAATAGTCGAAAAAGTATTCTCAATGGTAATGCATTTGAAGAAAATGCTAATGTTACTTTCGACTTGTCATTGAATTTGTGTAATCTCCCTCTACTTTATTCTGTACAAGTAGTTGTGGGTCAATGGATCACAAATGGAATTGATGTCACTGAATGGGACCCGGCTTGTGATAAACATATTGCTTTCAACTACTCTGTTGATGACCTTTCCGGGAAGCCCAAATGCAAGATTGCTTTGCAGAATGAATTGGGTCTTCCAGTGAGGCCTGATTGTCCATTGATTGGGTTCATTGGAAGACTGGACTACCAGAAAGGTATTGACTTGATCCGCTTGGCAATGCCAGAGCTCATGGAAGCTGATGTTCAGTTTGTAATGCTTGGTTCAGGAAACCCTATTTATGAAGACTGGATGAGAGCAACAGAGTCAGCTTATAGAGATAAATTTCGGGGTTGGGTGGGATTCAATGTTCCAATATCTCATAAAATAACTGCGGGCTGTGATATATTGTTAATGCCATCTGCATTCGAGCCCTGTGGACTTAACCAGTTGTATGCAATGAGATATGGAACTATACCCGTGGTTCATGAAACCGGGGGCCTAAGAGATACTGTTCATAATTTCAATCCATTCACTGAAGAGAGCAAAGATGAAAGCACAGGGTGGACGTTTTCGCCACTAACAAAGGAGAGCATGTTAGTGGCTCTAAGATATGCCATTCAAACATATAATGAACACAAGCCTTCTTGGGAGGGATTGATGATAAGGGGTATGACAAAAGATTATACATGGGTAAATGCTGCTACTCAATACGAGCAAATCATTGAGTGGGCATTCATCGACCCTCCCTACTGCTGA 2010 0.4483 MDSLQLHPLLLLHPRASSPSIRQLRFPSPLILNFRNVNLRSFSAHAGDAASHDGPFAFEEKIISHPKDDRALVLARETDDFGYLVGFRLIPESGLEEFMSVPHAIASSGEVEKPGIAVTDEAEAKTRVSHNICFVTAEAAPYSKTGGLADVCGSLPIALAARGHRVMVVTPRYIHGTAEDDKFAGAVDLDRCTKVMCFGGAQEVGFFHEFREGVDWVFVDHPSFHRPGNPYGDKFGTFGDNQFRFTLLSHAACEAPLVLSLGGFTYGEKCLFLANDWHASLVPVLLAAKYRPHGVYKDARSILVIHNIAHQGVEPAITYANLGLPPEWYGALGWVFPTWARTHALDTGEAVNFLKGAIVTADRIVTGYSWEITTSEGGYGLHELLNSRKSILNGNAFEENANVTFDLSLNLCNLPLLYSVQVVVGQWITNGIDVTEWDPACDKHIAFNYSVDDLSGKPKCKIALQNELGLPVRPDCPLIGFIGRLDYQKGIDLIRLAMPELMEADVQFVMLGSGNPIYEDWMRATESAYRDKFRGWVGFNVPISHKITAGCDILLMPSAFEPCGLNQLYAMRYGTIPVVHETGGLRDTVHNFNPFTEESKDESTGWTFSPLTKESMLVALRYAIQTYNEHKPSWEGLMIRGMTKDYTWVNAATQYEQIIEWAFIDPPYC 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01475 669 Gene3D Glycogen Phosphorylase B; 131 652 - -
Spst9g01475 669 Pfam Starch synthase catalytic domain 131 386 IPR013534 -
Spst9g01475 669 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 131 660 - -
Spst9g01475 669 Pfam Glycosyl transferases group 1 477 626 IPR001296 GO:0016757
Spst9g01475 669 Hamap Glycogen synthase [glgA]. 130 662 IPR011835 GO:0004373
Spst9g01475 669 CDD GT5_Glycogen_synthase_DULL1-like 131 661 - -
Spst9g01475 669 Gene3D Glycogen Phosphorylase B; 433 644 - -
Spst9g01475 669 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 428 668 - -
Spst9g01475 669 FunFam Starch synthase, chloroplastic/amyloplastic 131 406 - -
Spst9g01475 669 FunFam Starch synthase, chloroplastic/amyloplastic 434 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01475 Spst-Chr9 14863663 14871014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01475 131 659 Glycosyltransferase AT3G01180 47.866 1.24e-156 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01475 K00703 - gmx:100807354 1108.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01475 9 14863663 14871014 Spst9g01475 9 14863663 14871014 ECH