Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01425 ATGGCTTCGAAGAAAATCGAGCAACCTGCAATTGAAATAAACAATGAGGACACAAATATACGGGAATGTTCATCTCTTCCTCCATCGCCAAATTCCAATACTCAAAATTTGGGAATTACAGAACGAACTCTCTCCGCCGCAGGGGCCGCCTTCCTTTCAGTTATCATTGCCAACCCCCTCGATGTTGCCAAGACAAGGTTGCAAGCACAAGCGGCAGGGGTTGCACATTCTCATCCACTCAGTAATATGACCAGTAGAATGGCTTGTTTTGGCCCAAATATGATGTTTGCTGATTTAAGATGTTCTCCATCATGTCACCGGGCTGGAATCCAGGGCACGGTTTCCATTTGTCCTCCCGAGTGTTTTCGGTACAAAGGAACACTAGATGTCATCCACAAAATTATACATCAGGAGGGATTTACTAAGCTATGGACAGGCACAAATGCTGGCCTGGCTCTTGCAGTACCAACTGTGGGAATTTACCTTCCTTGCTATGACATATTCCGCAATTGGTTAGAGGAATTCACTGCTAAAAATGCACCAACTACAACTCCTTATGTTCCATTAGTAGCTGGTTCATTTGCTCGGTCTCTAGCTTGTGCAACTTGCTATCCTATTGAACTTGCTAGAACTCGTATGCAGGCATCTAAACTGACTCAAATTGGTAAAAAGCCTCCTGGTGTGTTTCAGACTCTGCTAGGTGTTATCTCGCATGTCAAAAGCACAAATAGTCCACGAAACAGTTTGCAAGGTTATCGTCTTTTGTGGACTGGCATGGGTGCTCAACTTGCCCGAGATGTACCCTTCTCTGCCATTTGTTGGTCGACTCTTGAACCTACTAGAAGAAAACTTCTTAGTTTGGTTAGACATGATGAGGCCAACGTGTTTAGTGTTCTTGGGGCAAATTTCGGAGCTGGTTTTGTTGCAGGAGCTTTAGCATCTGGAGCTACATGTCCTTTAGATGTAGCAAAAACTCGAAGGCAGATAGAGAAGGATCCTATGAAGGCATTGAAAATGACTACAAGGCAAACATTAACGGAGGTGTGGAGAGATGGAGGCTTCAAAGGATTGTTTACGGGTTTTGGTCCACGAGTTGGTCGAGTAGGCCCTTCTGTTGGATTTGTGGTCTCATTTTATGAAGTGGTAAAGTTTGTTCTACATCATCGGAAAAAAACATCTTCATAA 1185 0.4397 MASKKIEQPAIEINNEDTNIRECSSLPPSPNSNTQNLGITERTLSAAGAAFLSVIIANPLDVAKTRLQAQAAGVAHSHPLSNMTSRMACFGPNMMFADLRCSPSCHRAGIQGTVSICPPECFRYKGTLDVIHKIIHQEGFTKLWTGTNAGLALAVPTVGIYLPCYDIFRNWLEEFTAKNAPTTTPYVPLVAGSFARSLACATCYPIELARTRMQASKLTQIGKKPPGVFQTLLGVISHVKSTNSPRNSLQGYRLLWTGMGAQLARDVPFSAICWSTLEPTRRKLLSLVRHDEANVFSVLGANFGAGFVAGALASGATCPLDVAKTRRQIEKDPMKALKMTTRQTLTEVWRDGGFKGLFTGFGPRVGRVGPSVGFVVSFYEVVKFVLHHRKKTSS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01425 394 ProSiteProfiles Solute carrier (Solcar) repeat profile. 297 385 IPR018108 -
Spst9g01425 394 Gene3D Mitochondrial carrier domain 99 391 IPR023395 -
Spst9g01425 394 ProSiteProfiles Solute carrier (Solcar) repeat profile. 183 283 IPR018108 -
Spst9g01425 394 SUPERFAMILY Mitochondrial carrier 37 381 IPR023395 -
Spst9g01425 394 Pfam Mitochondrial carrier protein 301 387 IPR018108 -
Spst9g01425 394 Pfam Mitochondrial carrier protein 184 284 IPR018108 -
Spst9g01425 394 Pfam Mitochondrial carrier protein 37 173 IPR018108 -
Spst9g01425 394 Gene3D Mitochondrial carrier domain 19 97 IPR023395 -
Spst9g01425 394 ProSiteProfiles Solute carrier (Solcar) repeat profile. 37 171 IPR018108 -
Spst9g01425 394 PANTHER FI19922P1-RELATED 29 389 IPR045315 GO:1990542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01425 Spst-Chr9 14199910 14204606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01425 133 384 Organic Solute Cotransporters AT3G55640 26.744 4.45e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01425 K15119 - gmx:100778501 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01425 9 14199910 14204606 Spst9g01425 9 14199910 14204606 ECH