Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01419 ATGGACTACGATTTCAGGAGCAGGTCCGGCCTACAAGTTCCGACACACCATCCGTCACCGCCACCGTCGCCGATGTACCGTCCGACACCCTATCAGCAGAATCCTACTTCTTCCTCAGGAACAGGATTTGGCGTTAGGGTTGTTATAAAGCCAGAGTATAGGATCACACCACCGCCTCATTTATCATCACATGCGGGAGATAATCCACGGAGCAACTTCCAATTTGATTTTGGATTAGAGAAAAAATTTTTGGCTGAAGCGGATAAGGATAACCCAAATTGGAGCAAATTTGGAGCAGAAAATCTCCCGCCTAAAGTTTCTGATTCCTCTACAACGAAGGTTACTGCGTTGGATTCCATTGTGGGCAAATTTATAGCTATGGGGCTCAGCCAGGAGGCTGTTCCAATTGCTGTTCAAAACTATGGTGATAATCCAACCAAAGTTCAGGAATTTGTGAATGGATACACACTTCTACGTGAAATGGGATTTTCATCAAATAGCGTTGCTGAAGCTCTGGTTTTGAATGACAACCGTACGGACAGGGCACTAGCACATTTCCTTAGCGGTTCATCGTGA 576 0.4566 MDYDFRSRSGLQVPTHHPSPPPSPMYRPTPYQQNPTSSSGTGFGVRVVIKPEYRITPPPHLSSHAGDNPRSNFQFDFGLEKKFLAEADKDNPNWSKFGAENLPPKVSDSSTTKVTALDSIVGKFIAMGLSQEAVPIAVQNYGDNPTKVQEFVNGYTLLREMGFSSNSVAEALVLNDNRTDRALAHFLSGSS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01419 191 MobiDBLite consensus disorder prediction 15 29 - -
Spst9g01419 191 SUPERFAMILY UBA-like 147 189 IPR009060 GO:0005515
Spst9g01419 191 MobiDBLite consensus disorder prediction 1 43 - -
Spst9g01419 191 Gene3D UBAP1 SOUBA domain 105 191 IPR042575 -
Spst9g01419 191 PANTHER LD44032P 22 189 IPR038870 GO:0000813|GO:0043130|GO:0043162
Spst9g01419 191 FunFam Ubiquitin-associated/translation elongation factor EF1B protein 113 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01419 Spst-Chr9 14111561 14114080 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01419 - - gmx:100500107 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01419 9 14111561 14114080 Spst9g01419 9 14111561 14114080 ECH