Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01418 ATGGGTAACAATCGATCCCGCGTTCCCGCACTCCTCATCTCCATGTTCGCCACTTTCGCTTCTATCTACGTTGCTGGAAGGCTATGGCAGGATGCGGAGAATCGCGTTTATCTCATCAAAGAGCTCGACAGGATCACTGGCCAGGTCGTTATCGCGATTTCCGTACAGACGAATCGCGACCTATTGCACTGGATTTTAATTTTCGCGATTGCTGATTCAATTCACGCGTTTGAATTTGTTCTGGTTGAGAACCAGTTGATCGCGTCTGGACAATCTGCCATATCTGTGGATGATACATTGAAGATCATAGCCTGCAGGGAACAGCATAAGAAGCTTGCTGCCCTTGAGACGGAACTTGCTGCAGCTAAACAGGAGGGTTTTGTTTCGAAACCCTTGATAGAGACTAATGGAACTTACTCTACAAGAAGGCCGTTGGTTGTGATAGGTATCCTGACAAAGTTTGGCCGCCAGAAGAATAGAGATGCAATCCGCAAGGCATGGATGGGAAGCGGTGCATCTTTGAAGAAAATTGAAGATGGAAAGGGAATCATTGTGCGATTTGTTATTGGTAGAAGGTTCAAATTCCTACTTTTAGACTTGTTGGGGTTGGGTGAAAATCGCGGAGACAGTCTAGATAAAGACATTGATAGTGAGAATGGGCTGACTAATGACTTCATAATTCTTGATAATCACGTCGAAACAAATGATGCATTCCCAAAGAAGGCTAAATTATTCTTTGCTCATGCTGCAGACAAATGGGATGCTGAGTTTTATGCTAAAGTCAACGATGATGTCTATGTAAATATTGATGCCTTTGGAGCTACACTTGCTACTCATTTGGACAAACCTCGAGTTTACATGGGATGCATGAAATCAGGCGAAGTTTTCTCTGAGCTGAACCATAAATGGTATGAACCAGAGTGGTGGAAATTTGGTGACAAAAAATCATACTTTCGTCATGCATCAGGAGAGATGTATGTTATATCACGAGCTTTGGCTAAATTTATATCAATAAACAGGTCAGATATACTCCTAGCTGCACCTATGCTGTTGGCTCCCGAGCAATCTGTGCTGGTGTTTAAGTTGATTCCAGTGCATTCTGGCGAGAAGACCACAAACGCAGTGAAGTAA 1131 0.4341 MGNNRSRVPALLISMFATFASIYVAGRLWQDAENRVYLIKELDRITGQVVIAISVQTNRDLLHWILIFAIADSIHAFEFVLVENQLIASGQSAISVDDTLKIIACREQHKKLAALETELAAAKQEGFVSKPLIETNGTYSTRRPLVVIGILTKFGRQKNRDAIRKAWMGSGASLKKIEDGKGIIVRFVIGRRFKFLLLDLLGLGENRGDSLDKDIDSENGLTNDFIILDNHVETNDAFPKKAKLFFAHAADKWDAEFYAKVNDDVYVNIDAFGATLATHLDKPRVYMGCMKSGEVFSELNHKWYEPEWWKFGDKKSYFRHASGEMYVISRALAKFISINRSDILLAAPMLLAPEQSVLVFKLIPVHSGEKTTNAVK 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01418 376 Coils Coil 105 125 - -
Spst9g01418 376 Gene3D - 137 357 - -
Spst9g01418 376 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 113 339 IPR002659 GO:0006486|GO:0016020|GO:0016758
Spst9g01418 376 Pfam Galactosyltransferase 159 341 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01418 Spst-Chr9 14104484 14111314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01418 11 344 Glycosyltransferase AT5G53340 59.880 1.10e-138 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01418 K20854 - gmx:100779561 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01418 9 14104484 14111314 Spst9g01418 9 14104484 14111314 ECH