Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01361 ATGGCATATTTGGAGGAAATCCGAGAGAAACAAAGAGCTCGTGGCCCAGCCACCATACTCGCCATTGGTACTGCAACTCCATCCAACTGCATTTATCAATCTGACTTCACAGATTATTACTTTCGAGTCACTAAAAGCGAGCACATGACTCAACTCAAGGCCAAGCTAAAGCGCATATGTGAGAAGTCGATGATAAAGAAACGGTACATACACCTCACTGAAAAAATGCTGAAGGAGAACCCCAACATAAGCACTTATGAGGAACCATCCTTGGATGAACGCCAAGACATACTAGTTGAGGAGGTTCCTAAGCTTGGTGAGAAGGCAGCATCTAAAGCCTTGAAGGAATGGGGCAGACCAAAATCAGAAATTACTCATCTCATATTTTGCTCCACCTCGGGTGTAGACATGCCTGGTGCGGATTACCAACTTATCAGGCTCTTAGGCCTTAAACCATCCACCAAAAGGTTCATGTTGTACCACCAAGGTTGTTATGCTGGTGGCACCGTGCTTCGTCTCGCTAAAGACCTCGCTGAGAATAATGCTGGAGCACGTGTTCTGGTGGTATGTTCTGAGATCACGGTTGTCACATTTCGTGGACCCTGTGAAACACACTTGGACTCGTTGGTGGGACAAGCACTCTTTGGAGATGGAGCTTCATCCGTGATCGTTGGATCTGATCCTGACACATCCATTGAACGACCACTATTTCACCTTGTCTCAGCATCTGAGACAATTCTCCCCAACTCTGAAGGTGCAATTGAAGGGCACTTGCGTGAGGTTGGACTTACGTTCCATCTTAAGGACAACGTTCCTCAGTTGATTGGAGAGAACATAGAGAAAAGCCTTGAAGAAGCCTTCCACCCACTTGGCATCAGTGATTGGAACTCGTTGTTTTGGGTTACCCACCCTGGTGGCCCTGCAATCCTGAAGCAGATAGAAGCAACGCTTGGGTTGAACCCAGACAAACTGAGAGCAACTAAACAAGTTCTGAGTGAGTATGGGAACATGTCAAGTGCATGTGTGCTGTTTATTTTGGATGTGATGAGAAAGTGGTCGTCGGAGGAAGGGAAATCGAGCACTGGTGAAGGACTAAAGTGGGGTGTTTTATATGGGTTTGGTCCTGGCTTGACCATGGAGACCATTGCTTTGCATAGCGCCGCCATAGACCCAAACAACCAGCAGCCATGA 1191 0.4719 MAYLEEIREKQRARGPATILAIGTATPSNCIYQSDFTDYYFRVTKSEHMTQLKAKLKRICEKSMIKKRYIHLTEKMLKENPNISTYEEPSLDERQDILVEEVPKLGEKAASKALKEWGRPKSEITHLIFCSTSGVDMPGADYQLIRLLGLKPSTKRFMLYHQGCYAGGTVLRLAKDLAENNAGARVLVVCSEITVVTFRGPCETHLDSLVGQALFGDGASSVIVGSDPDTSIERPLFHLVSASETILPNSEGAIEGHLREVGLTFHLKDNVPQLIGENIEKSLEEAFHPLGISDWNSLFWVTHPGGPAILKQIEATLGLNPDKLRATKQVLSEYGNMSSACVLFILDVMRKWSSEEGKSSTGEGLKWGVLYGFGPGLTMETIALHSAAIDPNNQQP 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01361 396 SUPERFAMILY Thiolase-like 235 385 IPR016039 GO:0016746
Spst9g01361 396 Gene3D - 1 235 IPR016039 GO:0016746
Spst9g01361 396 CDD CHS_like 16 384 - -
Spst9g01361 396 FunFam Chalcone synthase 1 236 388 - -
Spst9g01361 396 Pfam Chalcone and stilbene synthases, C-terminal domain 239 386 IPR012328 -
Spst9g01361 396 PIRSF PKS_III 2 389 IPR011141 GO:0009058|GO:0016747
Spst9g01361 396 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 5 387 IPR011141 GO:0009058|GO:0016747
Spst9g01361 396 Pfam Chalcone and stilbene synthases, N-terminal domain 5 228 IPR001099 -
Spst9g01361 396 FunFam Chalcone synthase 2 1 235 - -
Spst9g01361 396 SUPERFAMILY Thiolase-like 1 233 IPR016039 GO:0016746
Spst9g01361 396 Gene3D - 236 387 IPR016039 GO:0016746
Spst9g01361 396 ProSitePatterns Chalcone and stilbene synthases active site. 156 172 IPR018088 GO:0009058|GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01361 Spst-Chr9 13321129 13323657 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01361 K00660 - nnu:104591893 625.165