Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01323 ATGAAGTCGTTGCATTTGAGACCCATCAAGGTCTCTCCCGCGGACATGACCATGAAGAAGAGAAAACGATCCCCAAAACAGACCCCACCTCCTCCCTCAACGCCCCCAACTCCCCAAACCCAGGCCCGCCACTCCCTCAACACCGCAAAAACCCGGGTCTGGTCCCCTCTCAACTTGACCCAGGTCGAACTCTATTTGCCACTCACTTTTCCGACGGGCCAAACCTTCCGCTGGAGAAGCACCGCCCCTCTACAATACACCGGCGTCGTTGGGCCCCACCTCATATCCCTCAAACACCTCCAAAACGGCGACGTTTCTTACTGCCTCCACTCTCACTCTCACCCTGAAAACGCCAAAACCGACTTGCTAGATTTCCTAAACGCCGCCGTTTCTCTCGCCGATTTATGGAAGACGTTTTCTGCTTCCGATGCGAGGTTTGCGGCGCTAGCGCGCCACTTGAGCGGTGCGAGGGTGCTCCGGCAAGACCCATTCGAGTGTTTGATCCAGTTTCTGTGCTCTTCCAATAACAACATTGCACGAATCACGAAGATGGTCAACCACGTGTCGTCCCTGGGAACACACGTGGGAGACGTTGGAGGGTTTCAGTTCCACGCTTTCCCTTCTTTAGAGCAACTTTCCTCCGTCTCAGAGCAGCAACTCAGAGACGCGGGTTTCGGTTACAGGGCGAAATATATAATTGGTACGGTTAATGCTTTGCGAACAAAACCTGGTGGAGGGGAAGAATGGCTTCGTACTCTTCGTAAGTTGGACCTTCCAGATGTTATATCTGCACTTTCTACGTTACCTGGTGTGGGTCCTAAAGTGGCTGCTTGCATTGCTCTCTTCTCGCTTGATCAACACCATGCCGTTCCTGTTGACACTCACGTGTGGCGGATTGCCACCAAGTATCTCTTACCTGAGCTTGCAGGTTCCCAGTTGACTCCAAAGCTCTGTAATCGTGTTGCAGAGGCATTTGTTACCAAGTATGGCAAATATGCTGGGTGGGCGCAGACTCTATTGTTCATAGCTGAATTACCTTCTCAGAAGGCCATCATACCTTCAGATTTGTGGACCATCAAACAACGGAATCCTGCAAAGATAGAAGACGGTGAAGAAGAAGTTGCTTTGATTGATATGTTGTAA 1143 0.5118 MKSLHLRPIKVSPADMTMKKRKRSPKQTPPPPSTPPTPQTQARHSLNTAKTRVWSPLNLTQVELYLPLTFPTGQTFRWRSTAPLQYTGVVGPHLISLKHLQNGDVSYCLHSHSHPENAKTDLLDFLNAAVSLADLWKTFSASDARFAALARHLSGARVLRQDPFECLIQFLCSSNNNIARITKMVNHVSSLGTHVGDVGGFQFHAFPSLEQLSSVSEQQLRDAGFGYRAKYIIGTVNALRTKPGGGEEWLRTLRKLDLPDVISALSTLPGVGPKVAACIALFSLDQHHAVPVDTHVWRIATKYLLPELAGSQLTPKLCNRVAEAFVTKYGKYAGWAQTLLFIAELPSQKAIIPSDLWTIKQRNPAKIEDGEEEVALIDML 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01323 380 Gene3D - 135 345 IPR023170 -
Spst9g01323 380 FunFam N-glycosylase/DNA lyase 162 286 - -
Spst9g01323 380 Pfam HhH-GPD superfamily base excision DNA repair protein 168 303 IPR003265 GO:0006284
Spst9g01323 380 FunFam N-glycosylase/DNA lyase OGG1 283 345 - -
Spst9g01323 380 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 38 360 - -
Spst9g01323 380 Gene3D - 40 127 - -
Spst9g01323 380 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 57 167 IPR012904 GO:0003684|GO:0006289|GO:0008534
Spst9g01323 380 CDD ENDO3c 164 342 IPR003265 GO:0006284
Spst9g01323 380 MobiDBLite consensus disorder prediction 1 45 - -
Spst9g01323 380 SUPERFAMILY DNA-glycosylase 162 343 IPR011257 GO:0003824|GO:0006281
Spst9g01323 380 Gene3D Hypothetical protein; domain 2 162 286 - -
Spst9g01323 380 SUPERFAMILY TATA-box binding protein-like 49 161 - -
Spst9g01323 380 SMART endo3end 172 345 IPR003265 GO:0006284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01323 K03660 - gmx:100789749 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01323 9 12869617 12871260 Spst9g01323 9 12869617 12871260 ECH