Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01322 ATGGTGAAGGTGTGGTGCTGGAGATGGTGTTTTCCGTTTGCTCTCATCTTAACGGTGTTAGTTGGTGCCGTCTACGGTGGCAATGTCACCTACGACGGAAGATCATTAATCATTGATGGCCAACATAGAATCCTCTTCTCCGGTTCAATTCATTATCCTCGTAGTACTCCGCAGATGTGGCCTAATTTAGTTGCGAAAGCTAAGGAAGGTGGATTAGATATCATACAAACTTACGTGTTTTGGAATCTTCACGAGCCTCAACAAGGCCAGTATAACTTTAGAGGAAGGCGTAATATAGTGAGATTCATTAAGGAAATTCAAGCACAAGGGTTATATGTAACCCTCCGAATTGGACCATACATTGAGAGTGAATGCACATATGGATCTGACAATGAGCAATTCAAGTTTCACATGCAAAGGTTCGCTGCCAAAATAGTCAACCTCATGAAATCAGCCAACCTTTATGCTTCACAGGGAGGACCTATTATACTATCACAGATTGAGAACGAGTATGGGAACGTTGAAGGGGCGTTTCACGAGAAAGGACTGTCTTACATTCGTTGGGCTGCCCAAATGGCTGTGGGACTTCAAACTGGTGTGCCTTGGGTGATGTGCAAGCAAGACAATGCTCCTGATCCGGTGATCAACACATGCAATGGCATGCAGTGCGGGAAAACTTTTAAGGGGCCTAACTCACCTAACAAGCCTTCACTCTGGACAGAGAACTGGACAATCTTTGGTGAAGTACCATACATAAGATCAGCTGAAGACATTGCATATAATGTTGCCCTGTTCATTGCAAAGAGAGGAAGCTATATCAATTACTACATGTCGCGTGATGAATTATTGGATTTGATGCAGTACCATGGAGGAACCAATTTCGACAGGATAGCCTCTGCTTTCGTAACAACATCCTATTATGACGAAGCTCCACTGGATGAATATGCCGAAAAATGGAAAGTGTACAAAGAAGTCATCCCCAGCTTTGACGATACTTCATTAAGAGCAAATACACTATTAGATCAAATCAGCACAGCAAAAGATACATCTGATTACATGTGGTACACATTCAGGTTTATTGGCAACTCTCCTAATGGTCAGTCCATTCTAAGTGCATACAGCCAAGGACATGTGTTGCATGCGTTCGTCAATGGAAATGTAGTAGGTTCTGCACACGGAAGTCACAAAAATGCAACTTTTGTCATGGAAAATAAACTCGATCTTATAAAAGGGGTGAACAATATTTCTTTCCTCAGTGCAACAGTTGGACTGCCGAACTCAGGAGCATATCTAGAGCACAAAGTTGCTGGTTTAAGTAGAGTGAAAGTTCAAGGCCGAGATGTCACTAATCAAGCATGGGGATATCAGGTTGGGCTGTTGGGAGAAAAATTGCAAATCTACACAGCTAGTGGATCAAGTAAAATTCAATGGGAAAGTTTTCAAAGCTCAACAAAGCCACTCACATGGTATAAGACCACATTTGATGCACCAGAGGGCAACGATCCTGTAGTGCTAAACCTTGCTTCTATGGGAAAGGGATATACTTGGGTTAATGGCCAAGGTATAGGCCGATATTGGGTATCTTTCATCACACCACAGGGAACTCCTTCACAAAAATGGTATCATATACCCCGATCCCTCCTAAAATCTACTGGGAATCTACTAGTTCTGCTAGAAGAAGAAACTGGGAACCCACATGCAATCACTCTAGACACAGTTTACATCACATCACAGTAA 1737 0.426 MVKVWCWRWCFPFALILTVLVGAVYGGNVTYDGRSLIIDGQHRILFSGSIHYPRSTPQMWPNLVAKAKEGGLDIIQTYVFWNLHEPQQGQYNFRGRRNIVRFIKEIQAQGLYVTLRIGPYIESECTYGSDNEQFKFHMQRFAAKIVNLMKSANLYASQGGPIILSQIENEYGNVEGAFHEKGLSYIRWAAQMAVGLQTGVPWVMCKQDNAPDPVINTCNGMQCGKTFKGPNSPNKPSLWTENWTIFGEVPYIRSAEDIAYNVALFIAKRGSYINYYMSRDELLDLMQYHGGTNFDRIASAFVTTSYYDEAPLDEYAEKWKVYKEVIPSFDDTSLRANTLLDQISTAKDTSDYMWYTFRFIGNSPNGQSILSAYSQGHVLHAFVNGNVVGSAHGSHKNATFVMENKLDLIKGVNNISFLSATVGLPNSGAYLEHKVAGLSRVKVQGRDVTNQAWGYQVGLLGEKLQIYTASGSSKIQWESFQSSTKPLTWYKTTFDAPEGNDPVVLNLASMGKGYTWVNGQGIGRYWVSFITPQGTPSQKWYHIPRSLLKSTGNLLVLLEEETGNPHAITLDTVYITSQ 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01322 578 SUPERFAMILY (Trans)glycosidases 26 326 IPR017853 -
Spst9g01322 578 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Spst9g01322 578 PRINTS Glycosyl hydrolase family 35 signature 300 316 IPR001944 GO:0004553|GO:0005975
Spst9g01322 578 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Spst9g01322 578 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Spst9g01322 578 PRINTS Glycosyl hydrolase family 35 signature 281 296 IPR001944 GO:0004553|GO:0005975
Spst9g01322 578 PRINTS Glycosyl hydrolase family 35 signature 485 499 IPR001944 GO:0004553|GO:0005975
Spst9g01322 578 PRINTS Glycosyl hydrolase family 35 signature 512 528 IPR001944 GO:0004553|GO:0005975
Spst9g01322 578 FunFam Beta-galactosidase 25 329 - -
Spst9g01322 578 Pfam Glycosyl hydrolases family 35 35 323 IPR031330 -
Spst9g01322 578 Gene3D Glycosidases 24 329 - -
Spst9g01322 578 PANTHER BETA-GALACTOSIDASE RELATED 20 315 IPR001944 GO:0004553|GO:0005975
Spst9g01322 578 SUPERFAMILY Galactose-binding domain-like 318 437 IPR008979 -
Spst9g01322 578 SUPERFAMILY Galactose-binding domain-like 452 575 IPR008979 -
Spst9g01322 578 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 159 171 IPR019801 GO:0004553|GO:0005975
Spst9g01322 578 FunFam Beta-galactosidase 455 578 - -
Spst9g01322 578 Gene3D - 449 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01322 Spst-Chr9 12860201 12868089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01322 317 576 Glycoside Hydrolase AT5G63800 46.642 4.28e-79 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01322 - - csin:114306042 680.633