Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01319 ATGAAATTCCGTTATTCGATCCTGCTTCTGCCAATCCTCCTCGCAGTCTTGGCGGTGGTTTCAGTCGCGGAGACCACTCCCTCCGCCTACGACCGCGTGTTGTTTCCTGACCGGCGGTGCCAGAGGATGGTGTCGGAGAACAGCACACGGCGCGGCCCGACGGCGGCGGCAGAGGCGGAGGCGGAGTGTGAGGTGTGGAGCGAGGCGTGTTCGAAGGCGGTGCTGAGCTTGGCGCGGCGGTTGGAGATGGCGGAGTGGCTGAGAGGGATTCGGCGGAAGATCCACGCGAATCCTGAGTTGGCGTTTGAGGAAATCGAGACGAGTCGTTTGGTGAGAGAGGAGTTGGATCTGTTGGAAGTTAGTTATCGGTACCCTCTCGCGAAGACCGGTATTCGAGCCTGGATCGGCACCGGTGGTCCGCCTTTTGTTGCCATCAGAGCTGACATGGACGCACTTCCCATCCAGGTTTCCTACTTCTCCCTCTCTTCCTTCCACCATCCACTACTTTTTATTCTTCCAATTTCTCCTTATGAAGCTGTGGAGTGGGAGCACAAGTCTAAAGTTGCCGGCAAAATGCATGCTTGTGGGCACGACGCACATGTGGCTATGCTTATTGGCGCTGCCAAGATCTTGAAAACTCGAGAGCATTTATTAAAGGGAACTGTAATTTTGATATTCCAGCCAGCAGAGGAAGCTGGTAATGGAGCAAAACGAATGATGCAAGATGGGGCTTTAGAGGATGTGGAGGCAATCTTTGCAGTTCATGTATCCCATGAACATCCCACTGGTATAATTGGGTCGCGGCCTGGACCTCTCCTTGCTGGTTGTGGGTTTTTCAGAGCTGTCATTAGTGGCAAAAAGGGTTTTGCCGCCAATCCTCATCGTTCTGTTGATCCAGTTTTGGCTGCTTCAGCTTCTGTTATCAGCCTACAGGGTATTGTTTCCCGCGAATCAAATCCTCTAGATTCTCAGGTTGTATCTGTAACTTTGCTTAATGGAGGCAACAATCTTGACATGATACCAGACACGGTGGTCCTCGGTGGGACTTTCAGAGCTTTCTCTAACACCAGCTTTTACCAGCTACGGGAAAGAATAGAACAGGTTATTGTTGAACAAGCAAGTGTGTATAGATGTTCAGCAGAAGTTGACTTCTTTGAAAACGAGTACACTATTTATCCTCCCACAGTGAATGATGATCGAATGTATGAGCATGTGAAGAAGGTGTCCATAGATTTGCTGGGTCAGAAGAATTTCAGGGTAGTTCCACCTATGATGGGTGCTGAAGATTTCTCTTTCTACTCCGAGGTGGTTCCCTCAGCTTTCTTCTACATAGGGATAAAGAATGAAACACTAGGGTCTACTCATACGGGACACTCCCCATATTTCATGATTGATGAAGACGTTCTACCAATAGGTGCTGCTGCTCATGCTACCATTGCAGAGAGGTACCTCATTGAACATGGCTCATGA 1470 0.4973 MKFRYSILLLPILLAVLAVVSVAETTPSAYDRVLFPDRRCQRMVSENSTRRGPTAAAEAEAECEVWSEACSKAVLSLARRLEMAEWLRGIRRKIHANPELAFEEIETSRLVREELDLLEVSYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQVSYFSLSSFHHPLLFILPISPYEAVEWEHKSKVAGKMHACGHDAHVAMLIGAAKILKTREHLLKGTVILIFQPAEEAGNGAKRMMQDGALEDVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGKKGFAANPHRSVDPVLAASASVISLQGIVSRESNPLDSQVVSVTLLNGGNNLDMIPDTVVLGGTFRAFSNTSFYQLRERIEQVIVEQASVYRCSAEVDFFENEYTIYPPTVNDDRMYEHVKKVSIDLLGQKNFRVVPPMMGAEDFSFYSEVVPSAFFYIGIKNETLGSTHTGHSPYFMIDEDVLPIGAAAHATIAERYLIEHGS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01319 489 Gene3D - 274 393 - -
Spst9g01319 489 SUPERFAMILY Zn-dependent exopeptidases 82 486 - -
Spst9g01319 489 NCBIfam amidohydrolase 88 472 IPR017439 GO:0016787
Spst9g01319 489 Gene3D Zn peptidases 90 477 - -
Spst9g01319 489 FunFam N-acetyldiaminopimelate deacetylase 274 392 - -
Spst9g01319 489 Pfam Peptidase family M20/M25/M40 181 481 IPR002933 GO:0016787
Spst9g01319 489 CDD M20_IAA_Hyd 87 484 IPR044757 GO:0009850|GO:0016787
Spst9g01319 489 PANTHER PEPTIDASE M20 FAMILY MEMBER 177 487 IPR017439 GO:0016787
Spst9g01319 489 SUPERFAMILY Bacterial exopeptidase dimerisation domain 275 384 IPR036264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01319 Spst-Chr9 12811098 12817282 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01319 K21604 - gmx:100785666 790.415