Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01315 ATGATCTCATCGTCGTCATGTTCTACTCACCAGGTATATTTGTCTCTGCAGTATGAAAAAGCTGCTTCTATCTTGAGTAGTCATGATCCTCCGGTTATATTGGCTAAAATTGACGCCGATGATGAGAACAACAAATACATTGCTGCAGAATTTGAAGTTAAGGTTTACCCAACAATTAGGATTCTTAGAAATGGGGGAAAGAATGTTCAAGATTACAAAGGTCCCCGCGTAGCAGATAGAATCGCTGATTATTTGAAGAAACAAAGTGGTCCCGCTTCAACTGAAATTAAATCTGTTGATGATGCTACCGCTTTTATTGAAGATAAAGTTGCTATTGTTGGAGTATTTCCGAAATTTTCTGGGGAGGAGTTCTATAACTTCACTGTGTTAGCAGAGAAGTTGCGTGATGACTATGAGTTTGGTCACACTCTGAGTGCCAAACACCTTCCAAGAGGAGAATCATCAGTTGCTGGGCCCATAGTTAGGTTATTCAAGCCATTTGACGAACTTTTTGTTGACTTTCAGGATTTTCATGTGGACGCTCTAGAGAAGTTTGTTGAACAATCTAGTCAGCCTGTTGTGACTATCTTTAACAATGATTTGAGAAATCATCCTTTTATTACCAAGTTCTTCAGTAGTCCCAATACAAAGGTAATGTTGTTTATCAACTTCACTGCCGAAGGTGCTGAAACTTTCGCATCAAAATTCCAAGAAACTGCCGAGCAATACAGACAACCAGGTGTAAGCTTTCTGTTGGGAGATGTCAGCTTTATTAAAGATTCTTTACAGTATTTTGGAGTGAAGGAAGATCAAGTACCTCTAATTTTGGTACAACATATTGATCGGAAGAAATTTCTCAAACCCAATTTGGAAGCTGATCACATTTTAACTTGGTTCAAGGCATACAAGGATGGAAATATTGCACCTTATTTTAAGTCTGAACCTATTCCTGAAGTTAACGACGAACCTGTTAAAGTGGTAGTTGGGAAAAGCTTCCAGGACATAGTTTTCAACTCTGGGAAGAATGTTCTGCTGGAGTTTTATTCTCCCTGGTGTCCTTACTGCACAGAGTTGGATCCAACAATGGAGGAAGTTGCTGTTTCATATCAAAGTGATGCTGATGTTATTATTGCAAAAATGGATGGAATTGCCAACGATAACCCAAGTGATTCCTTTGAAGCCACACGTTATCCAACTATTTACTTCAGGTCAGCAAGTGGAAAGATATCAAAATACGATGGCAATAAGACCAAGGAAGACTTCATAGAATTCATTGAAAAGAATAGGGAGAAACCTGTTCATCAAGAACAAGAAAAGGGTGAGAAAGAAAATGTAAAAGATGAGCTTTGA 1350 0.3852 MISSSSCSTHQVYLSLQYEKAASILSSHDPPVILAKIDADDENNKYIAAEFEVKVYPTIRILRNGGKNVQDYKGPRVADRIADYLKKQSGPASTEIKSVDDATAFIEDKVAIVGVFPKFSGEEFYNFTVLAEKLRDDYEFGHTLSAKHLPRGESSVAGPIVRLFKPFDELFVDFQDFHVDALEKFVEQSSQPVVTIFNNDLRNHPFITKFFSSPNTKVMLFINFTAEGAETFASKFQETAEQYRQPGVSFLLGDVSFIKDSLQYFGVKEDQVPLILVQHIDRKKFLKPNLEADHILTWFKAYKDGNIAPYFKSEPIPEVNDEPVKVVVGKSFQDIVFNSGKNVLLEFYSPWCPYCTELDPTMEEVAVSYQSDADVIIAKMDGIANDNPSDSFEATRYPTIYFRSASGKISKYDGNKTKEDFIEFIEKNREKPVHQEQEKGEKENVKDEL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01315 449 CDD PDI_b_family 93 187 - -
Spst9g01315 449 SUPERFAMILY Thioredoxin-like 94 192 IPR036249 -
Spst9g01315 449 FunFam Protein disulfide-isomerase 189 318 - -
Spst9g01315 449 CDD PDI_b'_family 209 303 - -
Spst9g01315 449 Gene3D Glutaredoxin 318 429 - -
Spst9g01315 449 NCBIfam protein disulfide-isomerase 16 449 IPR005792 GO:0003756
Spst9g01315 449 Gene3D Glutaredoxin 4 88 - -
Spst9g01315 449 Gene3D Glutaredoxin 89 192 - -
Spst9g01315 449 CDD PDI_a_family 18 85 - -
Spst9g01315 449 CDD PDI_a_PDI_a'_C 323 425 - -
Spst9g01315 449 SUPERFAMILY Thioredoxin-like 208 321 IPR036249 -
Spst9g01315 449 Coils Coil 435 449 - -
Spst9g01315 449 Pfam Thioredoxin 17 87 IPR013766 -
Spst9g01315 449 Pfam Thioredoxin 324 427 IPR013766 -
Spst9g01315 449 SUPERFAMILY Thioredoxin-like 17 91 IPR036249 -
Spst9g01315 449 SUPERFAMILY Thioredoxin-like 290 430 IPR036249 -
Spst9g01315 449 PANTHER PROTEIN DISULFIDE ISOMERASE 13 448 - -
Spst9g01315 449 ProSitePatterns Thioredoxin family active site. 344 362 IPR017937 -
Spst9g01315 449 FunFam Protein disulfide-isomerase 88 188 - -
Spst9g01315 449 ProSiteProfiles Thioredoxin domain profile. 302 430 IPR013766 -
Spst9g01315 449 Pfam Thioredoxin-like domain 116 295 - -
Spst9g01315 449 Gene3D Glutaredoxin 193 317 - -
Spst9g01315 449 MobiDBLite consensus disorder prediction 427 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01315 Spst-Chr9 12773899 12782711 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01315 K09580 - gmx:100170705 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01315 9 12773899 12782711 Spst9g01315 9 12773899 12782711 ECH