Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst9g01308 | ATGGATGTGCTGCTTCAGATTGATGGGCGTGATTTGAGGAACAATGACGATGATTCTCCCATGAGAATCCCAAGTGGATGTTGTTTATGTAGGCCAAGAAAATTAAATGGTTCGTCTTTTCCTTCCATGAATTCGGCTTCTAGAAATGAAAGCAGAAAGACTAACACCACCTCGAGCAAGAGCGATGATTTTATGCCTACCCCTCCTTCTCCTCCTTCATTGAACAGAAGCGGTCATCTGAACTCAAGGAATGCCAGCCACAGGAGCAATAATCCAATCATGTATTCCAATTCATCTGGGATGCTAAAACCTCCACCGATTGAGAAAAAACTAGAGTGCACTCTGGAAGACTTGTGCTATGGATGCAAGAAAAAGATCATGATCACAAGGGATGTGCTAACAGATACAGGGGGAATTGTTCAAGAGGAGGAAATGCTGACGATAAATGTGCAACCTGGATGGAAGAAAGGAACAAAGATTAAATTTGAAGGAAAAGGGAATGAGAGACCAGGGGCATACAGAGAAGATATAATATTTATCATCTCCGAGAAAAGACACCAGTTATTTCGAAGAGATGGAGATGATCTGGAATTGAGCGTAGAAATTCCCTTAGTAAAGGCACTTACTGGATGTACCATATTAGTTCCACTATTGGATGGAGAGCACATGAATTTGAAACTTGACAACATCATACACCCTGGCTATGAGAAGATCATCCCTGATCAAGGCATGCCAATCTCCAGAGAACCAGGGAAGAGAGGAAACTTGAAAATTAAATTTCTAGTTGAGTTTCCAACACATCTCACACATGATCAAAGATCAGAGGTTGTTCGTATTTTACATGATTCTTGA | 852 | 0.4108 | MDVLLQIDGRDLRNNDDDSPMRIPSGCCLCRPRKLNGSSFPSMNSASRNESRKTNTTSSKSDDFMPTPPSPPSLNRSGHLNSRNASHRSNNPIMYSNSSGMLKPPPIEKKLECTLEDLCYGCKKKIMITRDVLTDTGGIVQEEEMLTINVQPGWKKGTKIKFEGKGNERPGAYREDIIFIISEKRHQLFRRDGDDLELSVEIPLVKALTGCTILVPLLDGEHMNLKLDNIIHPGYEKIIPDQGMPISREPGKRGNLKIKFLVEFPTHLTHDQRSEVVRILHDS | 283 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst9g01308 | 283 | MobiDBLite | consensus disorder prediction | 74 | 98 | - | - | |
| Spst9g01308 | 283 | FunFam | DnaJ subfamily B member 13 | 186 | 266 | - | - | |
| Spst9g01308 | 283 | PANTHER | DNAJ HOMOLOG SUBFAMILY C MEMBER | 62 | 280 | - | - | |
| Spst9g01308 | 283 | MobiDBLite | consensus disorder prediction | 39 | 101 | - | - | |
| Spst9g01308 | 283 | MobiDBLite | consensus disorder prediction | 39 | 64 | - | - | |
| Spst9g01308 | 283 | CDD | DnaJ_C | 105 | 268 | - | - | |
| Spst9g01308 | 283 | Gene3D | - | 103 | 185 | - | - | |
| Spst9g01308 | 283 | FunFam | Dnaj homolog subfamily b member | 103 | 184 | - | - | |
| Spst9g01308 | 283 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 189 | 274 | IPR008971 | GO:0006457|GO:0051082 | |
| Spst9g01308 | 283 | Pfam | DnaJ C terminal domain | 107 | 265 | IPR002939 | - | |
| Spst9g01308 | 283 | Gene3D | - | 186 | 266 | - | - | |
| Spst9g01308 | 283 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 106 | 186 | IPR008971 | GO:0006457|GO:0051082 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Spst9g01308 | Spst-Chr9 | 12597428 | 12598951 | Dispersed/Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Spst9g01308 | K09519 | - | gmx:100782604 | 405.601 |