Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01294 ATGGCTCAAACCATGTTGCTCATGTCTAGTGTCTCTAGCAGCTACTCGGTGGATTTGAAGAAAGACCTTTTTCTCCAATTGAGGCCTAAGTTCTCTCAACTCTCATTCAGCCCTCTTCCATCATCAAGTTCTTTGTTTTCTTCACCTCGTACATTCACAACTTTGGCCCTCTTTAAATCAAAGACCAAGGCCACTCCTGCTAAGACCAAGGTTACGAAGCCAAAGCCAAAGGTTGAAGATGGTGTCTTTGGCACTTCTGGGGGGTTTGGTTTTACTAAGCAGAACGAGCTCTTTGTGGGGCGTGTTGCTATGCTTGGTTTTGCGGCATCACTGTTGGGTGAAGCATTAACTGGGAAAGGAATTCTAGCACAGTTGAATCTGGAAACTGGAATTCCCATTTATGAAGCAGAGCCTCTTCTTCTGTTTTTCATCCTTTTCACACTGCTAGGAGCCATCGGAGGTTTAGGTGACCGTGGACAATTTGTTGATGACGAACCTACCACTGGAGGTGTTATTCCTCCAGGCAAAGGCTTCAGAGAAGCTCTTGGTCTCGGTTCAGGTCCTTTGTTTGGATTCACGAAAGCGAACGAGCTATTTGTGGGAAGATTGGCTCAATTGGGATTCGTTTTCTCTTTGATTGGAGAGATTATTACTGGGAAGGGAGCACTGGCCCAGCTGAACATCGAGACTGGAGTACCAATCAACGAAATCGAACCCCTTGTGTTGTTCAACGTTCTTTTCTTCTTCGTTGCTGCTTTGAATCCTGGAACTGGGAAATTCGTTACAGATGAGGGGGATGAGGATTAG 807 0.4572 MAQTMLLMSSVSSSYSVDLKKDLFLQLRPKFSQLSFSPLPSSSSLFSSPRTFTTLALFKSKTKATPAKTKVTKPKPKVEDGVFGTSGGFGFTKQNELFVGRVAMLGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGGLGDRGQFVDDEPTTGGVIPPGKGFREALGLGSGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVLFFFVAALNPGTGKFVTDEGDED 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01294 268 Gene3D Chlorophyll a/b binding protein domain 50 132 - -
Spst9g01294 268 Gene3D Chlorophyll a/b binding protein domain 133 238 - -
Spst9g01294 268 FunFam Photosystem II 22 kDa protein, chloroplastic 51 135 - -
Spst9g01294 268 SUPERFAMILY Chlorophyll a-b binding protein 77 246 - -
Spst9g01294 268 Pfam Chlorophyll A-B binding protein 81 210 IPR022796 -
Spst9g01294 268 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 73 129 - -
Spst9g01294 268 FunFam Photosystem II 22 kDa protein, chloroplastic 136 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01294 Spst-Chr9 12511459 12512785 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01294 K03542 - gmx:100807355 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01294 9 12511459 12512785 Spst9g01294 9 12511459 12512785 ECH