Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01289 ATGAATGCCTATATTTTCGCTGTCGTCGTTCCTCTCCTCGTCCTCTTCTACCGCAACCGCAGTGCCGTCAAGCGCCGCGGCCTCCCCGCCGACGTAGGCGGCGAACGCGGCCTGGCGCTGAGGAATCACCGCTTCACTTCGCCGCTCAGTTCGGCCTGGGAGGGCGTCACCACGCTGGCGGAGCTCTTCGAGCGCGCATGTAGGGAGCATCAGGAGCGCGTGCTGCTTGGTACGCGCGAACTGATCGCGCGTGATATGGAGACATCTCCGGACGGTAGAACCTTCGAGAAACTTCACCTCGGGGACTACCAGTGGCTCACTTACGGGAGAGTCTTCGAATCCGTCTCGAGTTTCGCGTCCGGTTTGGCGTTGCTCGGTCATCGCAGGGAAGAGCACGTGGCTATATTCGCTGAAACCAGAGAACGTTGGTTTATTGCACTGCAGGGTTGCTTCAGGAGGAATGTGACAGTTGTGACCATATATTCGTCGTTGGGAGAGGAAGCTTTGTGTCACTCATTGAATGAGACAGATGTCACAACAGTGATTTGTGGGCGCAAAGAATTGACATCACTAGTACATATCAGTGGTCAACTTGATTCTGTGAAACGTGTTATATGCATGGACGATGATATTCCATCTGATACCTTGTCAGTTCAGAATGACTGGAAAATCACTTCCTTTGCTGATGTTGAGAGGCTTGGTAGAGAAAATCCTGTTGAGGCTGATTTACCCCTTTCAGCAGATGTTGCAGTTATAATGTACACTAGTGGAAGTACAGGATTGCCCAAGGGTGTAATGATGACACATGCCAATGTCCTGGCAACAGTTTCTTCTGTAATGATTATAGTTCCTAACCTTGGGCCAAAGGATGTCTATCTAGCATACTTGCCGATGGCTCATATCCTTGAATTAGTAGCTGAGAATTTGATTGCAGCTGTTGGAGGTCGTGTAGGATATGGAACTCCTTTGACTTTAACTGATACATCAAACAAAATAAAAAATGGGAAAAGGGGGGATGCCACTGCATTGATGCCAACTGTGATGGCAGCTGTACCCGCAATTCTTGATCGTGTACGTGAAGGAGTGCTCAAGAAGGTAAATGCAAAAGGAGGATTGTCAAAGAAATTGTTTTATTTAGCTTTTGCACGAAGGTTGCATGCACTTAATGGTAGCTGGTTTGGTGCTTGGGGCTTGGAGAAAGCTCTATGGAACCTTCTTGTGTTCAAGAAGGTTCAAGCAATTTTGGGTGGTCGCATTCGATTTATACTGTGTGGTGGTGCTCCCCTTTCTGGTGACACCCAAAGATTCATCAACATTTGTCTTGGTGCTCCAATAGGTCAAGGATATGGTCTCACTGAGACGTGTGCTGGTGGGACATTCTCTGATTTCGACGATACGTCTGTGGGCCGTGTTGGGCCACCTATTCCTTGCTCATATATTAAACTAATTGACTGGCACGAAGGTGGATATTCAACTGATGACTTGCCCATGCCCCGTGGTGAAATCGTAATTGGCGGTCCAAATGTCACTCTTGGTTACTTCAAAAATGAAGAAAAAACAAGAGAATCTTACAAGGTTGATGAAAGAGGAATGAGGTGGTTCTACACTGGTGACATTGGGAGATTTCATAAAGATGGTTGCATTGAGATCATTGATCGGAAAAAGGACATAGTTAAGCTACAGCATGGAGAATATGTTTCCTTGGGAAAGGTGGAGGCATCTCTTTCTACCAGTCCCTACGCAGACAATATCATGTTGCATGCTGATCCTTTTCATAGCTATTGTGTGGCACTTGTGGTAGTTTCACATCCCGCGTTGGAGCAATGGGCTTCACAGCAAGGAATTGCTTATTCTGATTTTTCAGAACTGTGCAGGAAAGAAGAAACTGTGAAGGAGGCGCATGCATCACTTGTAAAGGAAGCAAAGAAGGCTCGTTTGGAAAAGTTTGAGATTCCTGCAAAAATTAAGTTGCTTTCCGACCCATGGACTCCTGAATCTGGCCTAGTCACTGCAGCTCTTAAGCTGAAAAGAGAGATAATTAGAAAGACATTTCAAGAGGAGCTCTCAAAGTTATATGCCTCAGTCTAG 2088 0.4665 MNAYIFAVVVPLLVLFYRNRSAVKRRGLPADVGGERGLALRNHRFTSPLSSAWEGVTTLAELFERACREHQERVLLGTRELIARDMETSPDGRTFEKLHLGDYQWLTYGRVFESVSSFASGLALLGHRREEHVAIFAETRERWFIALQGCFRRNVTVVTIYSSLGEEALCHSLNETDVTTVICGRKELTSLVHISGQLDSVKRVICMDDDIPSDTLSVQNDWKITSFADVERLGRENPVEADLPLSADVAVIMYTSGSTGLPKGVMMTHANVLATVSSVMIIVPNLGPKDVYLAYLPMAHILELVAENLIAAVGGRVGYGTPLTLTDTSNKIKNGKRGDATALMPTVMAAVPAILDRVREGVLKKVNAKGGLSKKLFYLAFARRLHALNGSWFGAWGLEKALWNLLVFKKVQAILGGRIRFILCGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSDFDDTSVGRVGPPIPCSYIKLIDWHEGGYSTDDLPMPRGEIVIGGPNVTLGYFKNEEKTRESYKVDERGMRWFYTGDIGRFHKDGCIEIIDRKKDIVKLQHGEYVSLGKVEASLSTSPYADNIMLHADPFHSYCVALVVVSHPALEQWASQQGIAYSDFSELCRKEETVKEAHASLVKEAKKARLEKFEIPAKIKLLSDPWTPESGLVTAALKLKREIIRKTFQEELSKLYASV 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01289 695 ProSitePatterns Putative AMP-binding domain signature. 252 263 IPR020845 -
Spst9g01289 695 Gene3D - 50 553 IPR042099 -
Spst9g01289 695 Pfam AMP-binding enzyme 100 561 IPR000873 -
Spst9g01289 695 SUPERFAMILY Acetyl-CoA synthetase-like 55 692 - -
Spst9g01289 695 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 40 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01289 Spst-Chr9 12354593 12359699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01289 147 693 Acyl Lipid Metabolism Gene Families AT1G77590 76.782 0.0 903
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01289 K01897 - gmx:100778889 1261.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01289 9 12354593 12359699 Spst9g01289 9 12354593 12359699 ECH