Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01271 ATGAAGACTGCGAACATGGAAAATCAGAAGAGTGGGAGCAAGCTTACCAGAACCCATTCCTCGCTTCTTAGTTGTTCTTCCCCCGCAATTCGATCCTCCATCCACAGCCTCTCTTCCATCGTCACCAAAGAGGAACACGAATTACAGGAACAGGAAAAGCTACTTCTCGATGTTGACGACGACAAGAACAACAAGCCCAAGAAACCCCAAGCCCAAGCCCGACCGCGACCTCGTGCCCAAGCCCACCGGTCTTCCGCCTATTCCGCTCTGGCGGTCTTTTTCCTGGGCGCGTGTTCACTTTTGTTCTACTTCTTCTACCTCGAGGTGTCTTCCTCGGAGAACGTTTTGCTCGCGCTGATTTTCGTGGCCGTAGCTCTCTACTTTGTCTCCAAGAACAAGGGTCTGATTCAGAGATCCTTTTCCGCGGCGAAGCATTCGTGGGAGGAGAATGTGAAGCGGTTGGGGTTTTCGAAGGCAGTAGCGTCGAGGCCGGTGCAGTGGTTCATCGGAGAGCCGGCCGGGGCGGGGAGGAAGGCGGTGAAGATAGTGAGAGAAGGGGTGGAGTTTTACAGCAATGGGGATTTTTACGAGGGGGAGTTTCATAAGGGGAGGAGCAACGGGAGTGGGGTGTATCATTACTTCGTGAATGGGAGGTACGAAGGGGATTGGGTTGATGGAAGGTACGATGGGTACGGAATTGAGAGCTGGGCGAGGGGGAGTCGCTATAGGGGTCAGTATAGACAAGGATTGAGGCACGGTCATGGGGTTTATAGGTTCTACACGGGGGACTCTTATTCCGGAGAGTGGTGTAACGGTCAGAGCCATGGCGTGGGGCTTCAGACTTGCTCCGATGCTAGCTGTTACATTGGGCAATTTAAGTATGGGGTCAAGCACGGTCTTGGCTGTTATCATTTTAGAAATGGAGATAGGTATGCCGGAGAGTATTTCGGAGACAAGATACATGGATTTGGGGTCTACCACTTTGCCAACGGCCACTGTTATGAGGGAGCATGGCACGAGGGTCGTAGGCAAGGTATTGGCTCATACACTTTTCGAAACGGTGACAGAAGATGTGGTGAATGGGATGCTGGCAACCTCAAACAACCTCTACCACCATTATCTGATGTTGTTCTTCGAGCAGTGCAGGCTGCTAGGAAAACAGCAGAGAGTGCTATAAACCTTAAACGAGTGGATGACCAGGTTAACAAAGCAGTAATCGCTGCAAGCAAGGCTGCCACTGCTGCCAGAGTTGCTGCTGTGAAAGCTGTTCAGAACAGGATGGATGGAAAATTTTGCGTGACTGATGTCTAA 1311 0.5149 MKTANMENQKSGSKLTRTHSSLLSCSSPAIRSSIHSLSSIVTKEEHELQEQEKLLLDVDDDKNNKPKKPQAQARPRPRAQAHRSSAYSALAVFFLGACSLLFYFFYLEVSSSENVLLALIFVAVALYFVSKNKGLIQRSFSAAKHSWEENVKRLGFSKAVASRPVQWFIGEPAGAGRKAVKIVREGVEFYSNGDFYEGEFHKGRSNGSGVYHYFVNGRYEGDWVDGRYDGYGIESWARGSRYRGQYRQGLRHGHGVYRFYTGDSYSGEWCNGQSHGVGLQTCSDASCYIGQFKYGVKHGLGCYHFRNGDRYAGEYFGDKIHGFGVYHFANGHCYEGAWHEGRRQGIGSYTFRNGDRRCGEWDAGNLKQPLPPLSDVVLRAVQAARKTAESAINLKRVDDQVNKAVIAASKAATAARVAAVKAVQNRMDGKFCVTDV 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01271 436 Gene3D - 181 225 - -
Spst9g01271 436 Gene3D - 271 316 - -
Spst9g01271 436 Gene3D - 226 270 - -
Spst9g01271 436 Gene3D - 317 376 - -
Spst9g01271 436 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 30 424 - -
Spst9g01271 436 SMART morn 263 284 IPR003409 -
Spst9g01271 436 SMART morn 240 261 IPR003409 -
Spst9g01271 436 SMART morn 217 238 IPR003409 -
Spst9g01271 436 SMART morn 286 307 IPR003409 -
Spst9g01271 436 SMART morn 194 215 IPR003409 -
Spst9g01271 436 SMART morn 332 353 IPR003409 -
Spst9g01271 436 SMART morn 309 330 IPR003409 -
Spst9g01271 436 MobiDBLite consensus disorder prediction 1 20 - -
Spst9g01271 436 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 190 295 - -
Spst9g01271 436 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 261 364 - -
Spst9g01271 436 MobiDBLite consensus disorder prediction 55 79 - -
Spst9g01271 436 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 178 224 - -
Spst9g01271 436 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 271 316 - -
Spst9g01271 436 Pfam MORN repeat 196 213 IPR003409 -
Spst9g01271 436 Pfam MORN repeat 334 356 IPR003409 -
Spst9g01271 436 Pfam MORN repeat 265 284 IPR003409 -
Spst9g01271 436 Pfam MORN repeat 311 332 IPR003409 -
Spst9g01271 436 Pfam MORN repeat 288 310 IPR003409 -
Spst9g01271 436 Pfam MORN repeat 242 263 IPR003409 -
Spst9g01271 436 Pfam MORN repeat 219 241 IPR003409 -
Spst9g01271 436 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 225 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01271 Spst-Chr9 12112723 12114709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01271 192 366 Acyl Lipid Metabolism Gene Families AT1G21980 36.000 2.21e-28 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01271 - - gmx:100818442 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01271 9 12112723 12114709 Spst9g01271 9 12112723 12114709 ECH