Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01268 ATGTCGACGGTTTCCACTCAGAACGACAAGGCAACCCACAAAACGCATCAACCTTTGCAGATTGCAAAGCGCTTAGAGAAGTTTCAGACTACAATCTTCACTCAAATGAGCTTACTTGCCATCAAACATGGAGCCATAAACCTTGGTCAAGGCTTTCCCAATTTTGATGGTCCAGAGTTTGTAAAGGAAGCAGCGATTCAAGCAATCAGGGATGGGAAAAATCAGTATGCTAGGGGTTATGGAGTTCCAGACCTTAACATTGCCATTGCTGAAAGATTTAAGAAAGATACTGGACTAGTCGTAGACCCTGAAAAAGAAGTTACTGTTACATCTGGATGCACAGAAGCAATTGCTGCAACTGTATTAGGATTAATAAATCCCGGTGATGAGGTTATTCTGTTTGCTCCTTTTTATGATTCTTATGAGGCCACTTTGTCTATGGCCGGTGCAAAAGTCAAAAGCATTACTTTGCGCCCTCCCAATTTTGCTGTTCCTATTGAAGAGTTTAAGTCCACTATCTCAAAGAATACCCGTGCTATTCTGTTAAATACACCTCACAACCCTACTGGAAAGATGTTCACACGTGAGGAGCTCGACTGCATTGCATCTCTTTGCATTGAGAATGATGTTCTGGTTTTCACTGATGAAGTTTATGATAAGTTGGCTTTTGATATGGAGCACATTTCGTTGGCTTCCTTGCCTGGAATGTTCGAAAGGACAGTGACAATGAACTCCTTGGGGAAGACATTTTCCTTAACCGGATGGAAAATTGGTTGGGCTATAGCGCCCCCACACTTATCATGGGGAGTGCGTCAAGCCCACGCATACCTCACTTTTTCAACCGCTCATCCTTTTCAGTATGCTGCTGCAGTAGCTCTGAGAGCAGCAGACTCTTACTATGCAGAGCTGAAGAGGGATTACATGGCAAAGAAAGCTATTTTGGTTGAGGGATTGAAGGCTGTTGGCTTCAAGGTATTCCCATCCAGTGGAACCTACTTTGTGGTTGTAGATCACACCCCTTTTGGACTGGAAAATGATATTGCATTTTGTGAATATCTGGTTAAGGAAGTGGGAGTGGTGGCTATTCCTACCAGTGTATTTTACTTGAATCCTGAAGAGGGTAAGAATCTTGTCAGATTTACGTTCTGCAAGGATGAGCAAACTATTAGGTCTGCTGTTGAGAGGATGAAACAGAAGCTTAGAAAATGA 1209 0.4285 MSTVSTQNDKATHKTHQPLQIAKRLEKFQTTIFTQMSLLAIKHGAINLGQGFPNFDGPEFVKEAAIQAIRDGKNQYARGYGVPDLNIAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATVLGLINPGDEVILFAPFYDSYEATLSMAGAKVKSITLRPPNFAVPIEEFKSTISKNTRAILLNTPHNPTGKMFTREELDCIASLCIENDVLVFTDEVYDKLAFDMEHISLASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLSWGVRQAHAYLTFSTAHPFQYAAAVALRAADSYYAELKRDYMAKKAILVEGLKAVGFKVFPSSGTYFVVVDHTPFGLENDIAFCEYLVKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEQTIRSAVERMKQKLRK 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01268 402 CDD AAT_like 46 398 - -
Spst9g01268 402 Gene3D - 58 296 IPR015421 GO:0003824
Spst9g01268 402 SUPERFAMILY PLP-dependent transferases 20 401 IPR015424 -
Spst9g01268 402 Gene3D Aspartate Aminotransferase, domain 1 35 396 IPR015422 GO:0003824
Spst9g01268 402 FunFam Aminotransferase, class I/classII 58 296 - -
Spst9g01268 402 Pfam Aminotransferase class I and II 46 395 IPR004839 GO:0009058|GO:0030170
Spst9g01268 402 Coils Coil 390 402 - -
Spst9g01268 402 PANTHER FI04487P 21 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01268 Spst-Chr9 12099859 12106727 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01268 K23977 - gmx:100818968 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01268 9 12099859 12106727 Spst9g01268 9 12099859 12106727 ECH