Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01249 ATGGTTAGTGGGTTCGGGTCACACCCGCAACTTGTTGCGTGGAAACATGTAGTAGTGACCGGTCATAGGGGTGGAGCCACCTTGTTTTTTCCGACTTTGGTAACGCTGTTTGAAGTCAGAGAAGAAACATTGATGCTGTTGCGCAACCCTTCTTGGACAGCATTGTTGCTATCAGCCACCACAAGGAGGATCTTCAACCACCGCTTTTCTACACCTTCGTTCATGGCGTCTCAAGCATTGGACTGCAATTTGCTGGTTTTATGTGGAAAATCATTGGCAGAGAATGAAACTGCCAAAGCTATAAAAACCAATAACACTCTCAAGCTCCCTGGGAATGGAGTATACTCCCTCATTTTGCATGCGGAGCTTGATAAGGCTGTTATGCAAGGGTCTTTTCAAATTCACTCCTTTATGGATTCTCTTTCCACCAATCAATTTGGCAGGCTTCTCATCTGGTCCCCTCAGTTACCTTCAACACATGATATCGTTTCACAAAATTTTTGTGAGCTTCCCATTGGTTCAGTTTGTGTTGCTGATGTTCAGACCAAGGGACGAGGTCGGTCGAAGAATGTCTGGGAGTCTCCATTGGGTTGCCTCATGTTTTCTTTTACTTTGCAAATGGAGGATGGCCGAGTTGTTCCTTTGGTTCAGTATGTGGTTTCCCTAGCTATTACAGAGGCAGTCAAGGATATCTGTTACAAAAATGGGTTACCCAGCATAGATGTTAAAATCAAGTGGCCAAACGATCTTTACTTAAATGGCTCTAAAGTTGGGGGCATTCTCTGCACCTCATCATATAAATCAAAGAAGTTCAACGTTAGTGCAGGAATAGGCTTGAATGTCAATAATGAGAAGCCAACAACATCCTTAAATACAGTTTTGAACGAGTTGTCTACAGGAGCTTACCAATTTCAAAGAGAAGATATTCTAGCTGCCTTTTTTAAAAAATTTGAGGAACTTTATGGTTTATTTGTGAATCAAGGATTTCAGACTCTAGAGGAGCTATATATTAAAACATGGTTGCACAGGGGTCAATCTGAATCTCCAACATTTTGTCACAATGCTGACTATGAAGCAGAAATACTCTTCTTGTTGGAGACGTTAGACGCGTTTACTGGATCAGCAATTCCTCAACACTTACATGACATGGGCTGGCTTCTGGAAAATGAAGATTCTAACCGTGTAAAAGACTATGTGTTTACAGTAAATCTTGGGTATGTGGACAAAAGAAAATCTATACGTGAATATGGTGTTGTGCTTTCCAGTGCGCGAGGAGTGCCACGTGTCAGAGATGATGAATGCAGTGCAGCGTATGGTTTGACTGGGCCTTTGGTCAATGTCTTGCAAAGAGAAAAGGAAATGTCCCTGATCCTCTGCGCCTGGACTAGTCTTCGCCCTAAACGAAAGCAACCTCTCGACACGTTTTTACACCCACCCTACCACAAAAATATCTCCCAGATGAACCTAGCAAGGTGCCACAACTACACTGTATCTCTGACTATCTTCATGCGCTGTGGCGGCGTAGAAACACAGCACCTTATCTCCTACTGCCACCTCATCTCACCGGAAAAATACCTTCTCTCGTTCATCACTGATCCCCTCCTTAACTTCCCCATAGAGTAA 1623 0.4331 MVSGFGSHPQLVAWKHVVVTGHRGGATLFFPTLVTLFEVREETLMLLRNPSWTALLLSATTRRIFNHRFSTPSFMASQALDCNLLVLCGKSLAENETAKAIKTNNTLKLPGNGVYSLILHAELDKAVMQGSFQIHSFMDSLSTNQFGRLLIWSPQLPSTHDIVSQNFCELPIGSVCVADVQTKGRGRSKNVWESPLGCLMFSFTLQMEDGRVVPLVQYVVSLAITEAVKDICYKNGLPSIDVKIKWPNDLYLNGSKVGGILCTSSYKSKKFNVSAGIGLNVNNEKPTTSLNTVLNELSTGAYQFQREDILAAFFKKFEELYGLFVNQGFQTLEELYIKTWLHRGQSESPTFCHNADYEAEILFLLETLDAFTGSAIPQHLHDMGWLLENEDSNRVKDYVFTVNLGYVDKRKSIREYGVVLSSARGVPRVRDDECSAAYGLTGPLVNVLQREKEMSLILCAWTSLRPKRKQPLDTFLHPPYHKNISQMNLARCHNYTVSLTIFMRCGGVETQHLISYCHLISPEKYLLSFITDPLLNFPIE 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01249 540 SUPERFAMILY Class II aaRS and biotin synthetases 137 340 IPR045864 -
Spst9g01249 540 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 135 325 IPR004143 GO:0036211
Spst9g01249 540 Gene3D Bira Bifunctional Protein; Domain 2 138 339 IPR045864 -
Spst9g01249 540 NCBIfam biotin--[acetyl-CoA-carboxylase] ligase 153 346 IPR004408 GO:0004077|GO:0036211
Spst9g01249 540 CDD BPL 150 324 IPR004408 GO:0004077|GO:0036211
Spst9g01249 540 Pfam Biotin/lipoate A/B protein ligase family 154 280 IPR004143 GO:0036211
Spst9g01249 540 PANTHER BIOTIN PROTEIN LIGASE 84 346 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01249 K01942 - gmx:100818402 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01249 9 11880417 11898298 Spst9g01249 9 11880417 11898298 ECH