Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01248 ATGCATCCTTTCTGCTGTGTATCCGCCATTTCCGACCAGGCCTCGCCAGTGAAACCCTCGTTCGCCGACTTCGCCATGCCGCCACTCCCTGCCGCCGCCGCCGCCGCAGTGAGATCCGATTCGGCTCCGCGGCACAGCCACAGCGGGAGTCTGCGGGAGCAGCCTGTGGACGTGAAGATCAACGATCTCGTCGGGAACGGAATCTCCGGAATACTGTACAAGTGGGTGAATTACGGCAAAGGATGGCGACCGCGTTGGTTCGTACTCCAAGACGGTGTTCTCTCCTACTACAAGATTCACGGACCTGATAAGATCGTCGTGAATCCCGAAACCGAGAAAGGCTCCATGGTCATCGGCGAAGAATCCATGCGCAGAATCACTCGCAACCGCAATTCCTATCCCTGCCAGCACGTTTCGACCATTCGCGAGAGCAAATCGGACGACAAGCGATTCTCGGTCTTCACCGGAACGAAGAGGCTCCATCTGAGGGCGGACACGCGTGAGGATCGCGTGGCGTGGATGGAGGCGTTGCAGGCCGTGAAGGACATGTTCCCGCGGATGTCGAACAGCGAGTTGATGGCTCCTGTGGACAATGTGACCATTTCGACGGAGAAACTGAGACTGAGGCTTCTGGAAGAGGGAGTGAGCGAGGGGGCTATTCAGGACAGTGAGCAAATCATGAGGACTGAGTTTGCGGCGCTGCAAAGCCAGCTTGTGCTGCTTAAGCAGAAGCACTCCATTCTCATTGACACTTTGCGCCAATTAGAGACAGAAAAGGTTGATCTGGAAAATACAGTAGTTGATGAGAGCCAAAGACAGTGGAATGATGAAGAGGCTTCCTCAAGATTAGCGCAAGAAAAGTTTAGTGAAGGAACTGCAAGTGAATCTGAAGATGACAATGAGCGAAATGACGCTGCAGAGGAAGAAACCGACGATGATGACAACGCCTTTTTTGATACTCGTGATATTCTATCTTCCAGTTCTTTTAAAAGTAATGGGTCTGATTATCGAATGTCATCCTTCTCTTCTGATGATGAAGGATTCTATGCTTTTGAATCAGAGGATGACATAGATCCTTCGATTAGATATGTTGGAACCAATTATCCTCATGTTAAGCGGCGAAAGAAATTGCCAGACCCTGTAGAAAAAGAGAAAGGTGTCAGTCTGTGGTCAATGATTAAGGATAATATAGGGAAGGATCTAACAAAAGTTTGCCTTCCTGTTTATTTTAACGAGCCTCTTTCCTCCCTACAAAAATGTTTTGAAGAAATGGAGTATTCATATCTTTTGGACCAAGCATATGAATGGGGAAGAAGAGGTAATAGCCTCATGAGGATTCTCTATGTTGCGGCTTTTGCTGTATCTGGCTATGCTGCAACAGAAGGAAGGGTGTGCAAACCATTTAATCCATTACTTGGGGAAACATACGAGGCTCACTATCCAGATAAAGGCCTTCGGTTTTTCTCGGAGAAGGTCAGTCATCACCCTATGATCGTCGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGGAGATAGCAACCTAAAGAGCAAATTTTGGGGGCGATCAATTCAGCTTGACCCTGTTGGTGTTTTGACTTTGGAATTTGATGATGGGGAAGTTTTCCAGTGGAGCAAGGTTACTACATCAATATACAATCTCATTTTGGGAAAGCTATACTGCGATCACTATGGTACAATGCGTATACAGGGAAACCACGAGTACTCGTGTAAGCTGAAATTCAAGGAACAATCTATAATTGATCGAAATCCTCATCAGGTTCATGGTATCATTCAAGATAGGAACGGAAAAACTGTGTCAACTTTGTTTGGAAAATGGGATGAAAGCATGCATTACGTTAATGGAGACTACACCGGTAAAGGGAAAGGTCATGAATCTTTGTCAGATGCCCATTTGCTCTGGAAGCGAAGCAAGGCTCCGAAGATTCCCACTAGATATAACTTCACTCGCTTTGCCATTACACTAAACGAACTGACCCCTGGATTGAAGGAGAAGTTGCCACCCACAGATTCAAGGTTAAGACCAGACCAAAGGTATTTGGAAAATGGGGAGTATGACATGGCAAATTCAGAAAAGTTACGGCTAGAGCAGCGGCAGCGCCAGGCTCGGAAGATGCAAGAGAGTGGTTGGAAACCACGGTGGTTTGCTAAGGATAAAGCGAGCGGGACATACCGTTATGTAGGAGGATATTGGGAGGCCCGACAAAGAGGCAACTGGAACTCCTGCCCCGACATCTTCGGTCAAATTCCTTCCGATCATATTTCTGACGAAGGTCAAATTACATTTTAG 2313 0.473 MHPFCCVSAISDQASPVKPSFADFAMPPLPAAAAAAVRSDSAPRHSHSGSLREQPVDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNPETEKGSMVIGEESMRRITRNRNSYPCQHVSTIRESKSDDKRFSVFTGTKRLHLRADTREDRVAWMEALQAVKDMFPRMSNSELMAPVDNVTISTEKLRLRLLEEGVSEGAIQDSEQIMRTEFAALQSQLVLLKQKHSILIDTLRQLETEKVDLENTVVDESQRQWNDEEASSRLAQEKFSEGTASESEDDNERNDAAEEETDDDDNAFFDTRDILSSSSFKSNGSDYRMSSFSSDDEGFYAFESEDDIDPSIRYVGTNYPHVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSYLLDQAYEWGRRGNSLMRILYVAAFAVSGYAATEGRVCKPFNPLLGETYEAHYPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNHEYSCKLKFKEQSIIDRNPHQVHGIIQDRNGKTVSTLFGKWDESMHYVNGDYTGKGKGHESLSDAHLLWKRSKAPKIPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYDMANSEKLRLEQRQRQARKMQESGWKPRWFAKDKASGTYRYVGGYWEARQRGNWNSCPDIFGQIPSDHISDEGQITF 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01248 770 Coils Coil 245 272 - -
Spst9g01248 770 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 67 742 IPR000648 GO:0008289
Spst9g01248 770 SUPERFAMILY Oxysterol-binding protein-like 383 763 IPR037239 -
Spst9g01248 770 MobiDBLite consensus disorder prediction 300 316 - -
Spst9g01248 770 Gene3D - 67 191 IPR011993 -
Spst9g01248 770 SUPERFAMILY PH domain-like 68 182 - -
Spst9g01248 770 Gene3D - 474 654 - -
Spst9g01248 770 FunFam Oxysterol-binding protein-related protein 2A 685 756 - -
Spst9g01248 770 Pfam Oxysterol-binding protein 388 742 IPR000648 GO:0008289
Spst9g01248 770 Gene3D - 685 746 - -
Spst9g01248 770 ProSiteProfiles PH domain profile. 65 182 IPR001849 -
Spst9g01248 770 SMART PH_update 66 184 IPR001849 -
Spst9g01248 770 FunFam oxysterol-binding protein-related protein 1D isoform X1 474 646 - -
Spst9g01248 770 CDD PH_ORP_plant 68 189 - -
Spst9g01248 770 MobiDBLite consensus disorder prediction 271 317 - -
Spst9g01248 770 Pfam Pleckstrin homology domain 73 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01248 Spst-Chr9 11874568 11880013 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01248 K20456 - gmx:100137077 1441.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01248 9 11874568 11880013 Spst9g01248 9 11874568 11880013 ECH