Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01247 ATGCGCCAAGCACTTGTACACGACACTAGGAACAAAAACCCAGACGCCGAGAGAGACACCTACAAGGTAACCGGCTGGAGCCGCTCACAAGGCGGCAACCGAAGAGTCACGCCCAGCGAGGAAGATTCAGAGGTAACTAGCAGCTTCCTGGAGAAGCGCTTGCCCAACGGTGACGTTTACATGGGGAGTTTCTCGGGCAACGCGCCCAGCGGATCGGGGAAGTATCTGTGGAGAGACGGGTGTATGTACGAGGGTGAGTGGAAGAAAGGGAAGGCGTGCGGGAAGGGGAAGTTCTCGTGGCCTTCAGGTGCCACCTACGAGGGGGAATTCAAATCGGGTCGGATGGAGGGGGTTGGGACCTTTACTGGATCCGAGGGCGAGACGTACTGCGGGTCGTGGAGCTCCGACAGAAAGCAAGGGTACGGCCAGAAGTGTTACGCGAACGGGGACTTCTACGAGGGGTTGTGGAAGCGGAACGTTCAGGAGGGGGAGGGAAGGTACGTGTGGAGAAACGGAAACGAGTACTGCGGGGAATGGAGGAACGGGGTGATTTGTGGGCGGGGTTCGCTGATTTGGGCCAATGGGAATCGTTACGAGGGGCAGTGGGAGAACGGGGTTCCCAAGGGGCAAGGGGTTTTCACTTGGCCCGATGGGAGCTGCTATGTTGGGTGCTGGAACAAGGACCTCAAGGTGCACCAGCTGGACGGAACTTTTTACCCCGGCACTGGTGATAATTTCACTGTCACTATGAGGAAGAGGTCCTCCGTTGACAGTTCCAGAGGGAGTTGTGTGAAGAGTTTTCCCAGGATTTGCATCTGGGAATCGGAGGGTGAAGCGGGGGATATAACCTGTGATATCATCGATAATGTGTCCTTGTTGTATCGGGATGGGAATGAAACCGGGTCGGATCGGGGACATATTAAGCCGTTTCGACGGAATCCTTGTTGTTTTACCGGTGAGGTGAAGAGACCGGGCCAGACTATATCCAAGGGACATAAGAATTACGATCTTATGCTTAATCTGCAATTGGGAATAAGATACTCTGTTGGGAAGGAAGCTTCCATTTCGCGAGAGCTTAAATCGAGCGATTTTGATCCCAAGGAGAAGTTCTGGACTAGGTTTCCCTCTGAAGGATCTAAGATTACGCCACCACATCTATCGGCGGAGTTCCGCTGGAAGGACTACTGCCCTATGGTTTTTAGACAGTTGAGGAAGCTATTTCAGGTGGACCCAGCTGATTACATGTTGGCCATATGTGGGAATGATGCCCTCAGGGAGCTTTCCTCTCCGGGGAAAAGTGGAAGCTTCTTCTACTTGACTCAGGATGACAGGTTTATGATAAAAACCGTGAAGAAATCCGAAGTCAAGGTGCTTCTTCGGATGCTCCGAAGTTATTACCGACATGTTTCTGATTATGAGAACTCACTTGTTACAAAGTTCTATGGAGTACACTGTGTCAAACCAATTGGAGGCCAAAAGACACGCTTTATTGTGATGGGCAACCTTTTCTGCTCGGAATATCCAATCCATAGACGATTTGACTTAAAAGGATCTTCCCATGGTCGTACAACAGATAAGACCAAGGAGGAAATTGATGAAACCACCACCCTTAAGGACCTGGATCTCAATTTTGTGTTTCGTCTACAAAAAAATTGTTTCCAGGATCTCATCAAACAAATTGAGCGGGACTGTGAGTTCTTGGAAGCCGAGGGAATTATGGATTACAGTCTCTTAGTCGGTCTTCATTTTCGTGATGATAATACATATGAAAAAATGGGATTGTCACCGTTTCTTTTGCGCACTGGAAAGGGGGATTCCTATCAGAGCGAAAAGTTCATGCGTGGTTATCGCTTTCTTGAAGCAGAGCTGCAGGATAGAGATCGGGTTAAATCTGGTCGGAGATCATTGATTAGACTAGGAGCCAATATGCCTGCGAGAGCAGAGCGCTTGGCTCGGAGGAGTTATTTTGATCAATACTCCCCTTGTTGCAGCGGTGAAACATACGACGTTGTTTTATATTTTGGGATTATTGACATTTTGCAAGATTACGATATCAGCAAGAAACTGGAGCATGCTTACAAGTCTTTACAGGTTAACCCGTCATCAATCTCAGCCGTTGATCCGAAGCTCTATTCAAAAAGGTTCCGGGATTTTGTGGGTAGAATATTCATTGAGGACTGGTAA 2184 0.4899 MRQALVHDTRNKNPDAERDTYKVTGWSRSQGGNRRVTPSEEDSEVTSSFLEKRLPNGDVYMGSFSGNAPSGSGKYLWRDGCMYEGEWKKGKACGKGKFSWPSGATYEGEFKSGRMEGVGTFTGSEGETYCGSWSSDRKQGYGQKCYANGDFYEGLWKRNVQEGEGRYVWRNGNEYCGEWRNGVICGRGSLIWANGNRYEGQWENGVPKGQGVFTWPDGSCYVGCWNKDLKVHQLDGTFYPGTGDNFTVTMRKRSSVDSSRGSCVKSFPRICIWESEGEAGDITCDIIDNVSLLYRDGNETGSDRGHIKPFRRNPCCFTGEVKRPGQTISKGHKNYDLMLNLQLGIRYSVGKEASISRELKSSDFDPKEKFWTRFPSEGSKITPPHLSAEFRWKDYCPMVFRQLRKLFQVDPADYMLAICGNDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLLRMLRSYYRHVSDYENSLVTKFYGVHCVKPIGGQKTRFIVMGNLFCSEYPIHRRFDLKGSSHGRTTDKTKEEIDETTTLKDLDLNFVFRLQKNCFQDLIKQIERDCEFLEAEGIMDYSLLVGLHFRDDNTYEKMGLSPFLLRTGKGDSYQSEKFMRGYRFLEAELQDRDRVKSGRRSLIRLGANMPARAERLARRSYFDQYSPCCSGETYDVVLYFGIIDILQDYDISKKLEHAYKSLQVNPSSISAVDPKLYSKRFRDFVGRIFIEDW 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01247 727 Gene3D - 135 181 - -
Spst9g01247 727 Gene3D - 182 238 - -
Spst9g01247 727 Gene3D - 62 134 - -
Spst9g01247 727 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 320 501 IPR027484 -
Spst9g01247 727 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 329 723 IPR002498 GO:0016307|GO:0046488
Spst9g01247 727 MobiDBLite consensus disorder prediction 1 47 - -
Spst9g01247 727 FunFam Phosphatidylinositol 4-phosphate 5-kinase 320 501 - -
Spst9g01247 727 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 419 721 IPR002498 GO:0016307|GO:0046488
Spst9g01247 727 MobiDBLite consensus disorder prediction 1 22 - -
Spst9g01247 727 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 69 723 IPR023610 -
Spst9g01247 727 CDD PIPKc_AtPIP5K_like 334 722 - -
Spst9g01247 727 SMART PIPK_2 360 724 IPR002498 GO:0016307|GO:0046488
Spst9g01247 727 FunFam Phosphatidylinositol 4-phosphate 5-kinase 182 250 - -
Spst9g01247 727 SMART morn 81 102 IPR003409 -
Spst9g01247 727 SMART morn 127 148 IPR003409 -
Spst9g01247 727 SMART morn 150 171 IPR003409 -
Spst9g01247 727 SMART morn 104 125 IPR003409 -
Spst9g01247 727 SMART morn 173 194 IPR003409 -
Spst9g01247 727 SMART morn 196 217 IPR003409 -
Spst9g01247 727 SMART morn 58 79 IPR003409 -
Spst9g01247 727 Coils Coil 550 570 - -
Spst9g01247 727 FunFam Phosphatidylinositol 4-phosphate 5-kinase 90 134 - -
Spst9g01247 727 PIRSF PIP5K_plant 3 250 IPR017163 GO:0005524|GO:0016308
Spst9g01247 727 PIRSF PIP5K_plant 241 727 IPR017163 GO:0005524|GO:0016308
Spst9g01247 727 SUPERFAMILY SAICAR synthase-like 330 723 - -
Spst9g01247 727 Pfam MORN repeat 83 104 IPR003409 -
Spst9g01247 727 Pfam MORN repeat 60 82 IPR003409 -
Spst9g01247 727 Pfam MORN repeat 198 219 IPR003409 -
Spst9g01247 727 Pfam MORN repeat 152 173 IPR003409 -
Spst9g01247 727 Pfam MORN repeat 129 150 IPR003409 -
Spst9g01247 727 Pfam MORN repeat 106 126 IPR003409 -
Spst9g01247 727 Pfam MORN repeat 175 197 IPR003409 -
Spst9g01247 727 Gene3D - 502 723 - -
Spst9g01247 727 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 55 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01247 Spst-Chr9 11859853 11863337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01247 27 726 Acyl Lipid Metabolism Gene Families AT1G77740 74.930 0.0 1088
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01247 K00889 - gmx:100813118 1338.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01247 9 11859853 11863337 Spst9g01247 9 11859853 11863337 ECH