Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01235 ATGCTCATCACAAGCAGGATGTGGGACCCACCCGAATCAAACGGGATGCTTATTGCGCAGCATCAGCGGGACCAACAGCTGCAAGTGATCTCAGGGGACTGCGCGACCAAGAAGATGCAACCAAAGGATGCAGTGAGCGAGTTGCAGAAAACCCATGAAGCCATCCAAGCTTTAGACAAACAAGTTTCCATGCTTCAAATGGAGCTAGCAGCAGCTAGGAGTTCTCGTGAAAGTGGGATCTCGGATTCAAATGCTTCATCCACCACTTCCGGGGAAGGTTCTCCAAGGAAGAAAGCATTTATTGTGATAGGCATAAACACCGCTTTCAGTAGCAGGAAGAGGCGTGATTCAGTTAGAGAGACTTGGATGCCTCAAGGTGAACAACTACTTCAGCTGGAACGGGAGAAGGGAATTGTTATCAGGTTCATGATTGGCCACAGTGCAACTTCCAACAGTATTCTAGATCGAGCTATTGATTCTGAAGAATCCCAGCACAAAGACTTTCTTCGCCTGGAACATGTTGAAGGGTATCACGAGTTGTCTGCAAAGACCAAGATTTTCTTTTCTACTGCAGTTGCAATATGGGATGCTGATTTCTATGTCAAGGTGGATGATGATGTCCATGTTAATTTAGGTGTCTTGGCAACAACCCTTGCTCGTCACCGATCAAAACCCAGGGTCTACATTGGGTGTATGAAATCTGGGCCAGTCCTTTCCAGAAAGGATGTCAAATACCATGAACCTGAGTTTTGGAAGTTTGGAGAAGAGGGGAACAAATACTTCCGACATGCAACTGGGCAGATATATGCAATCTCTAAGGATCTAGCCACTTACATTTCCATCAACCAGCCGATTTTGCATAAATATGCTAATGAAGATGTCTCGCTTGGTGCATGGTTCATCGGTCTTGAAGTTGAACATATTGATGACCGCAATATGTGCTGTGGAACTCCTCCAGACTGTGAGTGGAAGGCACAGGCAGGTAACATATGTGTTGCCTCATTTGATTGGAGCTGCAGTGGAATCTGCAAGTCAGTGGAGAAGATTAAATATGTCCACTCAAAGTGTGGTGAAGGGGATGGAGCTGTTTGGAGTGCTTTATTTTAG 1107 0.4571 MLITSRMWDPPESNGMLIAQHQRDQQLQVISGDCATKKMQPKDAVSELQKTHEAIQALDKQVSMLQMELAAARSSRESGISDSNASSTTSGEGSPRKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEESQHKDFLRLEHVEGYHELSAKTKIFFSTAVAIWDADFYVKVDDDVHVNLGVLATTLARHRSKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGAWFIGLEVEHIDDRNMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALF 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01235 368 MobiDBLite consensus disorder prediction 73 94 - -
Spst9g01235 368 Coils Coil 48 75 - -
Spst9g01235 368 Gene3D - 91 314 - -
Spst9g01235 368 MobiDBLite consensus disorder prediction 76 94 - -
Spst9g01235 368 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 59 309 IPR002659 GO:0006486|GO:0016020|GO:0016758
Spst9g01235 368 Pfam Galactosyltransferase 113 310 IPR002659 GO:0006486|GO:0016020|GO:0016758
Spst9g01235 368 FunFam Hexosyltransferase 93 314 - -
Spst9g01235 368 Pfam Domain of unknown function (DUF4094) 1 75 IPR025298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01235 Spst-Chr9 11689888 11693752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01235 2 368 Glycosyltransferase AT1G77810 74.595 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01235 K20855 - gmx:100776715 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01235 9 11689888 11693752 Spst9g01235 9 11689888 11693752 ECH
Spst8g01288 8 12015434 12018855 Spst9g01235 9 11689888 11693752 PCT