Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01227 ATGGCGGAAAGTTTGGAGCGCATTGACGTGAAGCTGTCTCCTGCGCCGGACCAAAGGATTCCGTTGATGAAATCAAGAAGAGGACGACGACGAGGGGACACGTGGGTGGTTTCAGTGTTCGTGATAATCCAAATCGGAGTTTTCATTGCAACCATGCTTGTCAACGATTGCTGGACCAATTCTCACGGAGATTGCCTCATCCAAACCCTTGGAAGGTTCTCCTTCCAGCCGCTCCCCGAAAATCCACTCCTAGGTCCTTCTCAGTCCAAGTTAGATGAAATGGGAGCTCTTCGATGGAGCCTTTTGATAGAGCAGCACCAAACTTGGCGTCTTTTAACATTTCCATTTTTACATGGTGGACTCTTCCACCTGCTTCTCAATCTCTGCAGTGTCGTCTACGTGGGAGTTCGCCTAGAGCGCGAATTTGGACCCATAAGGATTGGTACAATCTATGCATTGTCTGCTTTTGTGGGAGCCTTGGTGGCTTCTCTTTTTCTCCAAAACACCCCCGCCGTTGGCGCTTCTGGTGCTTTATATGGATTACTTGGAACATTGCTCTCCGAGCTTGTTTGGAACTGGAAATTTCATACCAATAAGATTTCAGCAATAGCAACATTAGTCTTTGTCTTTCTGTGCAACTTTGTCCTTGGTTTTCTGCCATATGTAGACAATTTTGCAAGCATTGGAGGTTTTATGTCAGGATTCCTTCTGGGATCTGTATTTTTACTCAGCCCTCAACTCCAATCAGTAGCTCCAAATAAAGGAGGTCTTATTGAGTATGGTGTCAAAAGTTACATCAAGTTAAAGTTGAAGCAAAAGCTGGACAGACCAGTTCTCAGGATTGTTTCTCTTATCCTCTTCGGCCTATTATTGGCTGGTTGTTTAGTGGCAGTTCTTCATGGAATCAACATCAACAGTTATTGCACATGGTGTCCATATGTCGACTGTATCCCTTTTACAAGCTGGCACTGCAAAGACACAGAAGCCTCTTGTGAGACAATGGTGAGCAATGCTCAGCTGACAATGACCTGTATCGGGAATGGCAACTTCAGGGTCTTTCCTTTTACCAACATTTCTCGGGCAAGGATGAATGATTTGTGCAATCTGATATGCTGA 1116 0.4516 MAESLERIDVKLSPAPDQRIPLMKSRRGRRRGDTWVVSVFVIIQIGVFIATMLVNDCWTNSHGDCLIQTLGRFSFQPLPENPLLGPSQSKLDEMGALRWSLLIEQHQTWRLLTFPFLHGGLFHLLLNLCSVVYVGVRLEREFGPIRIGTIYALSAFVGALVASLFLQNTPAVGASGALYGLLGTLLSELVWNWKFHTNKISAIATLVFVFLCNFVLGFLPYVDNFASIGGFMSGFLLGSVFLLSPQLQSVAPNKGGLIEYGVKSYIKLKLKQKLDRPVLRIVSLILFGLLLAGCLVAVLHGININSYCTWCPYVDCIPFTSWHCKDTEASCETMVSNAQLTMTCIGNGNFRVFPFTNISRARMNDLCNLIC 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01227 371 Pfam Rhomboid family 103 244 IPR022764 GO:0004252|GO:0016020
Spst9g01227 371 Gene3D - 30 244 IPR035952 -
Spst9g01227 371 SUPERFAMILY Rhomboid-like 32 246 IPR035952 -
Spst9g01227 371 PANTHER RHOMBOID-RELATED 21 324 IPR002610 GO:0004252|GO:0006508|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01227 Spst-Chr9 11603855 11606536 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01227 - - gmx:100793747 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01227 9 11603855 11606536 Spst9g01227 9 11603855 11606536 ECH