Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01217 ATGGGAGTACAAGGCACTTTGGAATACTTCTCAGACTTACTTAGCAGCACCAAAAAGAAGAAGAAGAAGAAGCAAACACAAACTGTAGCTCTGAAAATCAGAATGGACTGTGAAGGCTGTGCACGCAAGGTTAAGCATGTTCTTTCTGGTGTTAAAGGAGCTAAATCGGTGGAAGTGGACATGAAGCAGCAGAAAGCTACGGTGACAGGATATGTTGAGGCAAAGAAAGTTCTTAAGGCTGCTCAGTCTACGAAGAAGAAGGTTGAGCTGTGGCCATACGTTCCGTACACTATGGTGGCTAACCCTTATGTTTCTCAGGCCTACGATAAGAAGGCACCTCCTAATATGGTGAGAAAGGTGGCTGACACTTCCAAAATCTCAGAAACCACCATGGACGACAGCTACATGCAAATGTTCAGTGATGAAAACCCAAATGCCTGCTCTATCATGTAA 453 0.4437 MGVQGTLEYFSDLLSSTKKKKKKKQTQTVALKIRMDCEGCARKVKHVLSGVKGAKSVEVDMKQQKATVTGYVEAKKVLKAAQSTKKKVELWPYVPYTMVANPYVSQAYDKKAPPNMVRKVADTSKISETTMDDSYMQMFSDENPNACSIM 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01217 150 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 28 148 IPR045181 GO:0046872
Spst9g01217 150 ProSiteProfiles Heavy-metal-associated domain profile. 26 89 IPR006121 GO:0046872
Spst9g01217 150 Pfam Heavy-metal-associated domain 33 86 IPR006121 GO:0046872
Spst9g01217 150 CDD HMA 35 89 IPR006121 GO:0046872
Spst9g01217 150 SUPERFAMILY HMA, heavy metal-associated domain 26 92 IPR036163 GO:0046872
Spst9g01217 150 Gene3D - 13 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01217 Spst-Chr9 11508429 11508979 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01217 - - gmx:100782955 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01217 9 11508429 11508979 Spst9g01217 9 11508429 11508979 ECH