Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01207 ATGGAAACGGTGAAAAAACTGGAACAAGCAGCTAGAAGGTTGGCTAAATCTGTAAATTATGTTGGGGCGGCTACTGTTGAGTATCTCTATAGTATGGAAACTGGCGAGTACTACTTTTTAGAGTTGAACCCTCGACTTCAGGTTGAACATCCTGTTACAGAGTGGATAGCAGAGATAAATCTGCCAGCAGCACAGGTTTCAGTTGGGATGGGTGTCCCACTTTGGCAAATTCCTGAGATAAGGCGCTTTTATGGGGTGGAGCATGGTGGGGGGTACGATGCTTGGAGAAAAACTTCAGTTTTAGCTACCCCTTTTGATTTTGACAAAGCACAATCTACAAGGCCCAAAGGTCATTGTGTGGCTGTGCGAGTGACTAGTGAGGACCCTGATGATGGTTTTAAGCCTACAAGTGGCAAAGTGCAGGAGCTTAGCTTTAAAAGCAAGCCAAATGTGTGGGCATACTTCTCTGTCAAGTCTGGAGGAGGAATTCATGAATTTTCAGATTCACAGTTTGGACATGTCTTTGCGTTTGGAGAATCTAGGGCTTTAGCAATTGCGAATATGGTTCTGGGGCTGAAGGAGATTCAAATTCGAGGAGAAATCCGTACCAATGTTGATTACACCATTGATCTTTTGAATGCTTCTGACTACAGAGACAACAAAATTCACACAGGTTGGCTGGACAGTAGAATTGCAATGCGAGTTAGAGCAGAGAGGCCTCCCTGGTATCTTTCTGTCGTTGGAGGGGCACTCTATAAAGCTTCTGCTAGCAGTGCAGCTTTGGTTTCAGACTATGTTGGCTATCTTGAAAAGGGACAAATCCCTCCTAAGCACATATCTCTTGTCCATTCTCAAGTTTCCTTGAACATTGAAGGAAGCAAATATACAATTGACATGATACGAGGTGGATCTGGAAGTTATAGATTGAAAATGAATCAATCAGAGATAGAAGCAGAAATACATACTTTACGTGATGGAGGTTTGCTAATGCAGGCAATCAAATTTATAGCATTCCATGGTTTTTTGGATTTCTTACAGTTGGATGGAAACAGTCATGTAATATATGCAGAGGAAGAAGCAGCTGGAACTCGCCTTCTAATAGATGGAAGGACTTGCTTGCTTCAGAATGATCATGATCCATCAAAGTTAGTGGCGGAGACACCATGCAAGCTTCTGAGATATTTGGTTGCAGATGACAGTCATGTTGATGCTGACACACCATATGCTGAAGTTGAGGTCATGAAAATGTGCATGCCTCTTCTTTCACCTGCTTCTGGGATTATTCATTTCAAAATGTCTGAAGGTCAAGCAATGCAGGCTGGTGAACTTATAGCAAGGCTTGACCTAGATGATCCTTCAGCTGTAAGAAAGGCAGAACCCTTCACTGGGAGCTTCCCAGTCCTGGGACCTCCTACTGCAATTTCTGGTAAAGTTCATCAGAAATGTGCCGCAAGCTTAAATGCTACTCGGATGATTCTTGCTGGGTATGAGCACAATATTGATGAAGTTGTACAAAGTTTGCTTAATTGCCTTGATAGTCCTGAATTGCCTTTCCTTCAATGGCAAGAGTGCTTGGCAGTTCTGGCAACCCGTCTTCCCAAAGATCTAAAAAACGAGTTGGAATCAAAATATAAGGAGTTCGAGAGGATTTCAAGCTCCCAAATTGTTGATTTCCCAGCCAAATTATTGAAGGGAATTCTTGAAGCTCATCTTTCTTCCTGTCCGGAAAAAGAAAAAGGAGCACAAGAAAGACTAGTTGAACCTCTGCTGAGTCTTGTTAAGTCATATGAGGGTGGAAGAGAGAGCCATGCCCATATAATTGTTCAATCCCTTTTTGAAGAGTATCTTTCTGTTGAAGAATTATTTAGTGATAATATTCAGGCTGATGTAATTGAACATCTGCGTCTTCAATACAAGAAAGATCTGTTGAAGATTGTTGATATAGTGCTCTCTCATCAGGGCATCAAGACTAAAAATAAGCTGATATTGCGTCTAATGGATAAATTGGTTTACCCTAATCCTGCTGCCTATAGGGATCAGCTAATCCGTTTCTCTTTACTCAATCACACAAATTATTCTGAGTTGGCACTAAAGGCAAGTCAACTTTTGGAACAAACTAAATTAAGTGAACTTCGATCCAACATTGCTAGAAGTCTTTCTGAACTAGAGATGTTCACGGAGGATGGTGAAAATATTGATACTCCCAAGAGGAAGAGTGCCATTAATGACCGAATGGAGGACCTTGTGAGTGCTCCTTTGGCAGTTGAAGATGCGCTTGTGGGTTTATTTGATCACAGTGATCACACCCTTCAGAGGAGGGTCGTGGAAACTTATGTACGCAGGCTCTACCAGCCATATCTTGTCAAAGGGAGTGTTAGGATGCAATGGCACAGATCTGGTCTTATTGCCACATGGGAGTTCTATGACGAGTACATTGAAAGGAAGAATGGGGTTGAAGACCAAACATCAAATAAATCAGCAGAGGAGAAACATAGTGAGAAAAAGTGGGGAGTTATGGTTATAATTAAATCTCTTCAATTTTTGCCCGCAATTATCAGTGCTGCATTGAGGGAGGCAACAAATAACCTTCATGAAGCACTTACAAGTGGTTCCGAGGAACCAGTGAACCATGGTAATATGATGCATATTGGATTAGTGGGCGTCAACAACCAGATGAGTTTACTGCAAGACAGTGGTGATGAGGATCAGGCTCAAGAAAGAGTCAATAAATTAGCTAAAATACTCAAAGAGCAGGAAGTAGGCTCCACCATTAGAAATGCAGGTGTTGGAGTAATCAGCTGTATCATCCAAAGGGATGAAGGACGTGCCCCAATGAGGCACTCTTTTCACTGGTCAGAAGAAAAGCTGTACTATGCGGAGGAACCTCTGTTGCGTCATCTGGAACCTCCCCTGTCTATTTATCTTGAATTGGACAAACTTAAAGGCTATGAGAATATACGATATACTCCATCTCGAGATCGTCAATGGCACCTTTACACGGTTGTGGATAACAAGCCACAACCAATTCAAAGAATGTTTCTTCGCACACTTCTAAGACAGCCAACCACAAATGAAGGATTTTCTTCATATCAGAGGCTGAATGCAGAAACATCTGGTGCCCAATTGGCTATGTCCTTTACTTCAAGGAGCATTTTTTGGTCCTTGATGGCTGCAATGGAGGAGTTGGAACTTAATGCGCACAATGCCAATATAAAATCTGAGCATGCTCATATGTACCTCTACATCATACGGGAGCAACAAATAGACGACCTTGTTCCTTATACCAAGAGAATTAATGTAGTTGCTGGGAAAGAAGAAACAACAGTTGAGGAAATCTTGGAAGAATTGGCATGGGAAATCCATTCATCTGTTGGAGTAAGGATGCATAGATTAGGGGTTGTTGTGTGGGAAGTCAAGCTCTGGATGGCAGACTGTGGACAGGCAAATGGTGCTTGGAGGGTCATTGTAAACAATGTGACTGGACATACATGCACTATACATATATACCGAGAGAAGGAGGATACCAACACTCATAAAGTGGTATACAGTTCTGTCTCGGTTAAGGGTCCACTGCATGGTGTGCCAGTGAATGAAAATTATCAACCTTTGGGAGTTATTGACCGAAAACGTCTTTCAGCAAGAAAGAACAGCACCACATACTGCTATGATTTTCCTCTTGCGTTTGAAACAGCCTTGGAACAGTCATGGGCAATCCAACAACCAGGATTTCAAAGAGCCAAAGATAAAAATCTTCTAAAGGTAACAGAGCTTAAATTTGCAGACAAAGAAGGTAGCTGGGGTACTCCTCTTGTTCCTGTGGAACGTTACCCTGGACTCAATGATGTTGGTATGGTAGCCTGGTTTATGGATATGTGTACCCCTGAGTATCCATCTGGAAGAACAATATTGGTTGTTTCAAATGATGTGACCTTCAAGGCTGGTTCTTTTGGCCCAAGAGAGGATGCTTTCTTCCGTGCAGTAACTGATCTTGCATGTAAAAGAAAACTTCCTTTAATTTATCTAGCAGCAAATTCTGGTGCCCGTTTAGGTGTAGCAGAGGAAGTCAAATCCTGTTTCAGAGTTGGTTGGTCTGAGGAATCTAGTCCTGAGAACGGCTTTCAATACGTATATTTAACACCTGAGGACTATACTCGGATTGGATCATCAGTCATAGCACATGAATTAAATCTTGAAAGCGGAGAAACCAGATGGGTTATAGACACCATTGTTGGCAAGGAGGATGGCCTTGGGGTTGAAAACTTGAGTGGCAGTGGGGCTATTGCTGGTGCTTATTCAAGGGCATACAAGGAAACTTTTACATTGACATATGTGACTGGCAGAACTGTTGGAATAGGCGCTTATCTTGCTAGGCTTGGGATGAGATGCATACAGAGGCTTGATCAGCCCATAATTCTTACTGGTTTTTCAGCATTAAACAAACTTCTTGGTCGGGAGGTATACAGCTCTCACATGCAACTTGGTGGACCCAAAATCATGGCTACAAATGGAGTTGTTCATCTTACAGTCTCTGATGATCTTGAAGGTGTTTATTCTATATTGAAGTGGCTTAGCTATATTCCTTCCCATATAGGTGGTTCCCTTCCCATTGTTAAGCCTCTTGATCCTCCAGAAAGACCGGTGGAGTATTTCCCAGAAAACTCTTGTGATCCTCGTGCTGCCATTTCTGGAACCCTGGATGGCAATGGAAGATGGCTGGGAGGCATCTTTGACAAGGACAGCTTTGTGGAGACGCTGGAAGGATGGGCTAGAACAGTTGTTACAGGAAGGGCAAAACTTGGAGGAATTCCTGTGGGCATTGTTGCTGTAGAAACACAGACAGTAATGCAAATAATACCTGCGGATCCAGGTCAGCTTGATTCTCATGAGAGGGTTGTTCCTCAAGCTGGGCAAGTCTGGTTTCCTGATTCTGCAACCAAGACAGCCCAAGCAATATTGGATTTCAATAGAGAAGAGCTCCCTCTTTTCATTCTCGCAAACTGGAGAGGCTTTTCAGGAGGGCAAAGGGACCTTTTTGAAGGAATTCTTCAGGCTGGTTCAACTATTGTGGAGAACCTTAGAACATACAAGCAGCCCATATTTGTATACATCCCAATGATGGGTGAACTCCGTGGCGGTGCATGGGTGGTTGTTGACAGTCGAATCAATTCAGACCACATCGAAATGTATGCTGATCGAACTGCTAAAGGTAATGTCCTTGAGCCAGAAGGAATGATTGAGATCAAATTCAGAACAAGAGAATTATTGGAGTGTATGGGTAGACTCGATCAGCAGTTGATAACTCTGAAGGCAAAACTTCAGGAAGCCAAGAGTGACAGGGACCTCGCTGCCTTTGAATCCCTACAGCAACAGATTAAATCCCGTGAGAAACAGCTTTTGCCTTTGTATACCCAGATAGCTACGAAGTTTGCTGAACTGCATGATACTTCCTTAAGAATGGCTGCCAAAGGTGTAATTAGAGAAGTTCTGGACTGGCGTAACTCTCGTGCTGTCTTCTACCAGAGACTTCACCGAAGAATTGGAGAGCAGTCACTGATCAACACTGTGAGAGATGCTGCTGGAGACCATTTGTCACATGCATCTGCAATGAACTTGCTCAAAGAATGGTATTTGAATTCTGATATTGCCAATGGTAGAGAAGATGCGTGGTTGGATGATGAAGCCTTCTTCAAATGGAAGAATAATCCTGCAAATTACGAGAATAAACTAAAGGAACTGCGTGTGCAGAAAGTGTTGCTTCAATTGACAAACATTGGTGACTCAGCTCTAGATTTGCAAGCTCTACCTCAGGGTCTTGCTTCCCTTTTAAGCAAGTTGGAGCCATCGAGTCGTGGGAAGTTGACTGATGAACTTCGAAAGGTACTTGGTTAG 5889 0.4283 METVKKLEQAARRLAKSVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVSVGMGVPLWQIPEIRRFYGVEHGGGYDAWRKTSVLATPFDFDKAQSTRPKGHCVAVRVTSEDPDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEIQIRGEIRTNVDYTIDLLNASDYRDNKIHTGWLDSRIAMRVRAERPPWYLSVVGGALYKASASSAALVSDYVGYLEKGQIPPKHISLVHSQVSLNIEGSKYTIDMIRGGSGSYRLKMNQSEIEAEIHTLRDGGLLMQAIKFIAFHGFLDFLQLDGNSHVIYAEEEAAGTRLLIDGRTCLLQNDHDPSKLVAETPCKLLRYLVADDSHVDADTPYAEVEVMKMCMPLLSPASGIIHFKMSEGQAMQAGELIARLDLDDPSAVRKAEPFTGSFPVLGPPTAISGKVHQKCAASLNATRMILAGYEHNIDEVVQSLLNCLDSPELPFLQWQECLAVLATRLPKDLKNELESKYKEFERISSSQIVDFPAKLLKGILEAHLSSCPEKEKGAQERLVEPLLSLVKSYEGGRESHAHIIVQSLFEEYLSVEELFSDNIQADVIEHLRLQYKKDLLKIVDIVLSHQGIKTKNKLILRLMDKLVYPNPAAYRDQLIRFSLLNHTNYSELALKASQLLEQTKLSELRSNIARSLSELEMFTEDGENIDTPKRKSAINDRMEDLVSAPLAVEDALVGLFDHSDHTLQRRVVETYVRRLYQPYLVKGSVRMQWHRSGLIATWEFYDEYIERKNGVEDQTSNKSAEEKHSEKKWGVMVIIKSLQFLPAIISAALREATNNLHEALTSGSEEPVNHGNMMHIGLVGVNNQMSLLQDSGDEDQAQERVNKLAKILKEQEVGSTIRNAGVGVISCIIQRDEGRAPMRHSFHWSEEKLYYAEEPLLRHLEPPLSIYLELDKLKGYENIRYTPSRDRQWHLYTVVDNKPQPIQRMFLRTLLRQPTTNEGFSSYQRLNAETSGAQLAMSFTSRSIFWSLMAAMEELELNAHNANIKSEHAHMYLYIIREQQIDDLVPYTKRINVVAGKEETTVEEILEELAWEIHSSVGVRMHRLGVVVWEVKLWMADCGQANGAWRVIVNNVTGHTCTIHIYREKEDTNTHKVVYSSVSVKGPLHGVPVNENYQPLGVIDRKRLSARKNSTTYCYDFPLAFETALEQSWAIQQPGFQRAKDKNLLKVTELKFADKEGSWGTPLVPVERYPGLNDVGMVAWFMDMCTPEYPSGRTILVVSNDVTFKAGSFGPREDAFFRAVTDLACKRKLPLIYLAANSGARLGVAEEVKSCFRVGWSEESSPENGFQYVYLTPEDYTRIGSSVIAHELNLESGETRWVIDTIVGKEDGLGVENLSGSGAIAGAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMATNGVVHLTVSDDLEGVYSILKWLSYIPSHIGGSLPIVKPLDPPERPVEYFPENSCDPRAAISGTLDGNGRWLGGIFDKDSFVETLEGWARTVVTGRAKLGGIPVGIVAVETQTVMQIIPADPGQLDSHERVVPQAGQVWFPDSATKTAQAILDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPIFVYIPMMGELRGGAWVVVDSRINSDHIEMYADRTAKGNVLEPEGMIEIKFRTRELLECMGRLDQQLITLKAKLQEAKSDRDLAAFESLQQQIKSREKQLLPLYTQIATKFAELHDTSLRMAAKGVIREVLDWRNSRAVFYQRLHRRIGEQSLINTVRDAAGDHLSHASAMNLLKEWYLNSDIANGREDAWLDDEAFFKWKNNPANYENKLKELRVQKVLLQLTNIGDSALDLQALPQGLASLLSKLEPSSRGKLTDELRKVLG 1962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01207 1962 ProSitePatterns Carbamoyl-phosphate synthase subdomain signature 2. 39 46 IPR005479 GO:0005524
Spst9g01207 1962 Pfam Biotin-requiring enzyme 382 447 IPR000089 -
Spst9g01207 1962 Pfam Biotin carboxylase C-terminal domain 122 228 IPR005482 -
Spst9g01207 1962 Gene3D - 1532 1931 - -
Spst9g01207 1962 CDD biotinyl_domain 383 447 - -
Spst9g01207 1962 ProSitePatterns Biotin-requiring enzymes attachment site. 405 422 IPR001882 -
Spst9g01207 1962 Gene3D - 1200 1527 - -
Spst9g01207 1962 SUPERFAMILY ClpP/crotonase 1202 1528 IPR029045 -
Spst9g01207 1962 FunFam acetyl-CoA carboxylase 1-like 1 214 - -
Spst9g01207 1962 SUPERFAMILY ClpP/crotonase 1533 1923 IPR029045 -
Spst9g01207 1962 Pfam Acetyl-CoA carboxylase, central region 448 1192 IPR013537 GO:0003989|GO:0005524|GO:0006633
Spst9g01207 1962 Pfam Carboxyl transferase domain 1294 1846 IPR034733 -
Spst9g01207 1962 ProSiteProfiles Biotin carboxylation domain profile. 1 232 IPR011764 -
Spst9g01207 1962 FunFam acetyl-CoA carboxylase isoform X2 1532 1931 - -
Spst9g01207 1962 Gene3D Biotin dependent carboxylase carboxyltransferase 1350 1414 - -
Spst9g01207 1962 Gene3D - 1 214 - -
Spst9g01207 1962 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 3 87 - -
Spst9g01207 1962 Coils Coil 1758 1778 - -
Spst9g01207 1962 FunFam Acetyl-CoA carboxylase 1 378 449 - -
Spst9g01207 1962 SUPERFAMILY Rudiment single hybrid motif 116 229 IPR011054 -
Spst9g01207 1962 Gene3D - 378 449 - -
Spst9g01207 1962 ProSiteProfiles ATP-grasp fold profile. 5 70 IPR011761 GO:0005524|GO:0046872
Spst9g01207 1962 ProSiteProfiles Biotinyl/lipoyl domain profile. 374 448 IPR000089 -
Spst9g01207 1962 PANTHER ACETYL-COA CARBOXYLASE, ISOFORM A 2 1960 - -
Spst9g01207 1962 SMART Biotin_carb_C_2 121 228 IPR005482 -
Spst9g01207 1962 SUPERFAMILY Single hybrid motif 380 450 IPR011053 -
Spst9g01207 1962 Pfam Carbamoyl-phosphate synthase L chain, ATP binding domain 3 75 IPR005479 GO:0005524
Spst9g01207 1962 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 1199 1538 IPR011762 -
Spst9g01207 1962 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 1542 1857 IPR011763 GO:0016874
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01207 2 1962 Acyl Lipid Metabolism Gene Families AT1G36160 79.786 0.0 3270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01207 K11262 - gmx:100778658 3702.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01207 9 11328134 11340360 Spst9g01207 9 11328134 11340360 ECH