Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01151 ATGGCCGCTTCAAACTCTCTCCCTCAAATCAAATCCATTTTACCAACCCACTTCCTCCTCCCTTCCTCCACCACCCAATGCTACTCCTTTCCCGGGACTAGGCCCAGGCCCATCCAATCCGTTCACGCGGCTGACAACTCCGTCAATGTAGTGACCAACGGCAAACAGCAGCAATCGACGCGCGAGGCCAAGTGGGGCATCGACAGCTGGAAGTCCAAAAAGGCCCTCCAGCTCCCAGAATACCCGAACCAAGAGAAGCTCCAGGCGGTGCTCAAGAGCCTCGAAGCATTCCCTCCCATCGTCTTCGCCGGTGAGGCTCGTGACCTCGAGGAGCGCCTCGCCGATGCCGCCATGGGGAACGCGTTCCTCCTCCAGGGTGGAGATTGCGCCGAGAGCTTCAAGGAGTTTAACGCCAACAACATCCGCGACACCTTCAGAATCCTCCTCCAGATGAGCGTCGTTATGATGTTCGGTGGCCAGATGCCCGTTGTTAAGGTGGGACGAATGGCGGGTCAGTTCGCAAAACCGAGATCCGAGCAGATGGAGGAGAGGAAAGGGGTGAAACTCCCCAGTTACAGAGGCGATAATGTAAACGGAGATGTGTTCGAGGAGAAAGCCAGAATTCCTGATCCTGAAAGGATGATTAGAGCGTATAGTCAATCCGCTGCTACTCTGAATCTTCTGAGGGCATTTGCAACGGGAGGCTACGCTGCTATGCAAAGGGTTGGCCAGTGGAATTTGGACTTCACAGAGCACAGCGAGCAAGGAGACAGGTACCTAGAGTTTGCTCACCGAGTCGATGAGGCCCTTGGTTTCATGGCTGCTGCAGGCCTCACGGTGGAGCATCCCATAATGAAAACAACTGAGTTCTGGACATCACATGAATGTCTGTTATTGCCTTATGAACAATCACTCACTAGGATGGATTCAACTTCTGGTCTCTACTATGACTGCTCCGCACATATGCTTTGGGTTGGGGAACGGACCAGGCAGCTGGATGGTGCTCATGTTGAGTTTCTAAGAGGAGTTGCTAATCCTCTTGGAATCAAGGTAAGTCACAAGATGGATCCAAGTGAGCTTGTTAAACTGATCAACATCTTGAACCCCCAAAACAAACCAGGCAGAATAACTGTTATCACGAGGATGGGAGCGGAAAATATGAGGGTCAAGCTTCCACATCTGATCAGGGCAGTGCGCGGAGCTGGACGTATAGTGACTTGGGTCAGTGATCCTATGCATGGAAACACAATAAAGGCTCCGTGTGGACTCAAAACTCGCCCCTTTGATGCCATCAGGGCGGAGGTGAAAGCATTCTTCGACGTGCATGAACAGGAAGGAAGCCACCCAGGTGGGGTTCATCTAGAGATGACGGGTCAGAATGTGACTGAGTGCATTGGTGGGTCGAGAACTGTCACCTTTGATGATCTGGGCTCACGTTACCACACTCACTGTGACCCCAGGCTTAATGCTTCACAATCTCTTGAACTTGCTTTCATCATTTCTGAACGCCTCCGAAAGCGTAGGATCGCGTCGGATCGCCGCAGTATCTTTTCTCCTTTTCCTTAA 1566 0.5211 MAASNSLPQIKSILPTHFLLPSSTTQCYSFPGTRPRPIQSVHAADNSVNVVTNGKQQQSTREAKWGIDSWKSKKALQLPEYPNQEKLQAVLKSLEAFPPIVFAGEARDLEERLADAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVMMFGGQMPVVKVGRMAGQFAKPRSEQMEERKGVKLPSYRGDNVNGDVFEEKARIPDPERMIRAYSQSAATLNLLRAFATGGYAAMQRVGQWNLDFTEHSEQGDRYLEFAHRVDEALGFMAAAGLTVEHPIMKTTEFWTSHECLLLPYEQSLTRMDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSHKMDPSELVKLINILNPQNKPGRITVITRMGAENMRVKLPHLIRAVRGAGRIVTWVSDPMHGNTIKAPCGLKTRPFDAIRAEVKAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLGSRYHTHCDPRLNASQSLELAFIISERLRKRRIASDRRSIFSPFP 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01151 521 Pfam Class-II DAHP synthetase family 65 501 IPR002480 GO:0003849|GO:0009073
Spst9g01151 521 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 38 512 IPR002480 GO:0003849|GO:0009073
Spst9g01151 521 Gene3D Aldolase class I 257 506 IPR013785 -
Spst9g01151 521 FunFam Phospho-2-dehydro-3-deoxyheptonate aldolase 254 506 - -
Spst9g01151 521 SUPERFAMILY Aldolase 55 505 - -
Spst9g01151 521 NCBIfam 3-deoxy-7-phosphoheptulonate synthase class II 65 508 IPR002480 GO:0003849|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01151 Spst-Chr9 10601774 10605323 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01151 K01626 - gmx:100797019 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01151 9 10601774 10605323 Spst9g01151 9 10601774 10605323 ECH
Spst8g01209 8 11122305 11126303 Spst9g01151 9 10601774 10605323 PCT