Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01144 ATGGCATTTGACAAGAATGATGGGCTCCCATCACTTGGTGTTCGTGTTTCAAACCAAACCCCAAAACAAAAACTACAAATATGCTGCCACCGCTACATCCTCGCAGCCGCCAAGGTTCTTGGCAGATTCAACCGTGCCCGCGCTGCCAGGTTGACACTCCCGCATTATGCGTGTCAAACTCCTTTGTTTATGCCTGTCGGCACGCAAGGAACAATAAAGGGATTGACAAATAGCCAGCTCGAGGATATTGGTTGTCAAATAATACTTGGAAATACGTATCACTTGGCCCTTCGACCTACTTCTGAGCTTCTTGATGAAGTTGGTGGTCTACATAATTTTATGAATTGGCAACGGGGTCTGCTTACAGACTCTGGTGGCTTTCAAATGGTTTCTCTGTTGCATCTTGCTGATATCACAGAAAAAGGAGTGACATTTCAGTCACCAGTTGATGGAAAACCAATGCTTCTAACACCTGAGGAATCAATTCAAATCCAAAATAGAATTGGAGCAGATATCATTATGGCTCTAGATGATGTTGTGAAGACCACCATTACTGGTCCACGCGTTGAGGAAGCTATGTATAGAACACTTAGATGGATTGACAGATGTATAGCAGCTCACGAGAGACCTCATGATCAAAACTTGTTTGGTATTGTGCAAGGTGGTTTAGATCCTATTTTGAGGGATATCTGCGTCAAAGGTTTGGTGGAGCGCAATTTGCCTGGCTATGCTATTGGAGGTCTTTCAGGCGGTGAAGATAAAAAATCATTTTGGCGAGTTGTTGCTCAGTGCACTGCTGCTTTGCCAGAGGATAAACCACGATATGTTATGGGAGTTGGTTATCCACTTGATATAGTTGTTTGTAGTGCTTTGGGTGCTGACATGTATGACTGTGTGTACCCTACCCGTACAGCACGCTTTGGCACTGCTCTGATTCCTCAGGGAGTATTGAAACTAAAACACAGAGCAATGGCTGATGACACCCGTCCAATTGATCCTACTTGCCCTTGTATGGTTTGCAAGAACTATACCCGGGCTTACATCCATTCCCTTGTGACAAAGGATGCAATGGGGTCTCAACTTTTGTCGTATCATAATTTATACTACATGCTGCAGCTTAGTAGGAATCTACACTCTTCAATAGTTGAAGGACGGTTCCCAGAGTTTGTATGTGACTTTCTACACAAAATGTTTCCGAAAGGTGATGTTCCTGAATGGGTGTGCGATGCTATGGAGGTGGCTGGAATCGACATTTCTTCCTGCTGTGCTCCATTTTCATCGTGCCAACATGATTCCAAAAGCATGCCCGAAGAAGTTAGTTTAGCGAGCCGGCTCTCTGCGATTTTCAGAAAAAAGATGCCTCTGGGGCTCATTTTAGGTATAGGAAGAGCATTTCGAAGGAAGCGAACGTCTTCACTTGACATTTTATCATCTAAACGAGCTCCTCGTGGTTATTACAAGGGCAAGAATTGCAAGCCTACTGGTTTCCACACCCGCAAAGGTGGGTATGTATTGATGCAAGAAAAATTGCCAAATTATGTAGTTCCTGATTTGACTGATTTCAAGCTCAAACCATATGTATCTCAGTGTCCTATAGAAGTCAAGACTTCTGAAACTTCCCAAACCGGCTAA 1632 0.4387 MAFDKNDGLPSLGVRVSNQTPKQKLQICCHRYILAAAKVLGRFNRARAARLTLPHYACQTPLFMPVGTQGTIKGLTNSQLEDIGCQIILGNTYHLALRPTSELLDEVGGLHNFMNWQRGLLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRVEEAMYRTLRWIDRCIAAHERPHDQNLFGIVQGGLDPILRDICVKGLVERNLPGYAIGGLSGGEDKKSFWRVVAQCTAALPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALIPQGVLKLKHRAMADDTRPIDPTCPCMVCKNYTRAYIHSLVTKDAMGSQLLSYHNLYYMLQLSRNLHSSIVEGRFPEFVCDFLHKMFPKGDVPEWVCDAMEVAGIDISSCCAPFSSCQHDSKSMPEEVSLASRLSAIFRKKMPLGLILGIGRAFRRKRTSSLDILSSKRAPRGYYKGKNCKPTGFHTRKGGYVLMQEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSETSQTG 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01144 543 NCBIfam tRNA guanosine(34) transglycosylase Tgt 43 397 IPR004803 GO:0008479|GO:0101030
Spst9g01144 543 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 36 421 - -
Spst9g01144 543 Pfam Queuine tRNA-ribosyltransferase 45 397 IPR002616 GO:0006400|GO:0016763
Spst9g01144 543 Pfam Mitochondrial ribosomal protein L27 476 538 IPR019189 GO:0003735|GO:0005762
Spst9g01144 543 NCBIfam tRNA-guanine transglycosylase 42 397 IPR002616 GO:0006400|GO:0016763
Spst9g01144 543 SUPERFAMILY tRNA-guanine transglycosylase 39 396 IPR036511 GO:0006400|GO:0016763
Spst9g01144 543 Gene3D - 36 399 IPR036511 GO:0006400|GO:0016763
Spst9g01144 543 Hamap Queuine tRNA-ribosyltransferase [tgt]. 30 396 IPR004803 GO:0008479|GO:0101030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01144 K00777 - gmx:100819664 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01144 9 10477301 10493155 Spst9g01144 9 10477301 10493155 ECH