Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01143 ATGCTCCACCAGCCATTACTTTGCGGTTCTAAAGTCACCACTCCCTCCACATTCTTCGCTTCGGCGTTTTCCGCCGGAAACAACGCTGCCCGCTGTTCGTTTACTGGAAATTCGTCCGTCCGTCACGTGAGGTCGGTGAGGTTTATGAAGCAAGCATCGGGAAGCAAATCCAACAATGAACGTGGTGTTTTTAGTGAGACAATGGATCGTGCCAAGCACAGGACAACTAATGCTTATGGCGGTCGTGCTCAAGAAGGGGGGGTTCTTGAGGAAGAATCCTCCAAAGTGATAGAGAGCAGACCATCATGGAAAATTTTCCCAGGCCAGGCATTTCCATTAGGTGTATCAGAAGTTGACAGTGGCATCAATTTTTCCATTTTTTCACAACATGCAACTGCTGTCACACTTTGTTTAGTCCTTCCAGAGAGGGGAAGTATTGACCCATTGGATGGTGGCATGATAGAAATTGTCTTTGATCCTAATTTGAACAAAACCGGGGACATTTGGCACATATGTATTGAGGATCTCCCTCAAAGCAATGTTCTCTATGGATATCGCATAGATGGACCTCAGGACTGGGGTAAGGGGCATCGATTTGACAGCAGCATTGTGCTTGTTGATCCTTATGCAAAACTAGTTGAAGGTCGAAGATATTTTGGGGATGTTAACATGAAGTTGTCTACGTTTCTTGGCACATTTGATTTTGACAGCCTTCCTTTTGACTGGGGAGAAAATTACAAGCTTCCAAATATTTCTGAGCTAGCATTCTACCTTCGCTTTAAAGATCTTGTTATATATGAGATGAATGTCCGTGCATTTACAATTGATGAATCTAGTGGTTTGGATAGCAACATTCGTGGCAGCTACCTTGGTGTGATTGAAAAGATTCCACACCTTCTAGAGCTTGGTATCAATGCAGTTGAATTGCTTCCTGTCTTTGAGTTTGACGAGTTGGAATTCCAGAGGCGTCCAAATCCTAGAGATCACATGATTAATACATGGGGTTATTCAACAATAAATTTCTTTTCTCCTATGAGTCGCTATGCTAGTGCTGGTGGAGGATCAGTTAATGCTTCTCGAGAGTTCAAAGAAATGGTTAAAGCCTTACATTCTTCTGGTATAGAGGTTATTTTGGATGTTGTCTATAATCATACTAATGAGGCTGATGATGATAATCCTTACACTACCTCATTTCGTGGCATAGATAATAAGGTTTATTATATGCTGGACAATAATGGGCAATTGCTGAACTTCTCTGGCTGTGGCCCAATGTTCGGGCTGGGGCTGAAGTTTGTTGATCCCAATGCTAGGCATGTCTGGCTAAAACCCACACACAGTTATCATGACAAGAAATCTACTGGAAAGGAACCACAATTTTATCCAAATTGGACTGCTTTTGTTAATGCTCAATGTGTCCGGAATCAAGGACCTGAACCTATGCACCTAAGGCACTGGGTCACTGAATATCATGTGGATGGATTTCGATTTGATCTTGCAAGTGCCCTGTGTCGAGGAATTGATGGTTCCCCCCTCAATGCGCCCCCACTTATTAGGGCAATTGCAAAAGATGCAGTCTTATCAAGATGTAAAATTATTGCAGAGCCTTGGGACTGTGGAGGTCTTTATCTTGTTGGGAGTTTTCCAAATTGGGATCGGTGGGCTGAATGGAATGGGAAATATCGTGATGATGTACGGAAATTTATTAAGGGTGATTCTGGTGTGAAGGGGAGCTTTGCTACTCGCGTTGCTGGGTCTTCTGATCTTTACAGAATGAACAAGCGAAGGCCATATCATAGTATTAACTTTGTTATTGCTCACGATGGATTCACCTTGCGTGATCTTGTTTCATACAATTTCAAGCATAATGAAGCCAATGGGGAAGGTGGATATGATGGTAGCAATGATAATTTTAGTTGGAATTGTGGTTTTGAAGGGGAAACTGATGATGCTAGTATAAAAGCTTTGCGAGCACGGCAAATGAAAAACTTCCATTTGGCATTAATGATATCTCAGGGTACACCAATGATGCTAATGGGGGATGAATATGGACATACTCGCAATGGAAATAACAATAGTTATGGGCATGATACCGCCATTAATAGTTTTTTGTGGGATCAGTTGGATGCCAGGAAGAGTGATCACTTCAGGTTTTTCTCGAAGGTGATAAAGTACAGGCATGCACATGAAGTATTCAGTCATGAAAGTTTTCTCAGCAAGAATGACATAACATGGCATGAAGACCATTGGGACAATCATGACAGCAAATTTCTTGCATTCACGCTTCATGACAGGAGCGGGGGAGACATCTATTTGGCATTTAATGCTCACGACTACTTTATCAAAGTTCTGCTGCCCACGCCTCCAGAAAAGAGGAAGTGGCAACGTGTGGTGGACACTAATCTCAAATCGCCGGACGACTTTGTTCATGATGGTGTCCCTAGCGTAGGAAACACGTATAATATAGCTCCATACTCCTCCATTCTTCTTGAGGCGAAGTTTTGA 2502 0.4265 MLHQPLLCGSKVTTPSTFFASAFSAGNNAARCSFTGNSSVRHVRSVRFMKQASGSKSNNERGVFSETMDRAKHRTTNAYGGRAQEGGVLEEESSKVIESRPSWKIFPGQAFPLGVSEVDSGINFSIFSQHATAVTLCLVLPERGSIDPLDGGMIEIVFDPNLNKTGDIWHICIEDLPQSNVLYGYRIDGPQDWGKGHRFDSSIVLVDPYAKLVEGRRYFGDVNMKLSTFLGTFDFDSLPFDWGENYKLPNISELAFYLRFKDLVIYEMNVRAFTIDESSGLDSNIRGSYLGVIEKIPHLLELGINAVELLPVFEFDELEFQRRPNPRDHMINTWGYSTINFFSPMSRYASAGGGSVNASREFKEMVKALHSSGIEVILDVVYNHTNEADDDNPYTTSFRGIDNKVYYMLDNNGQLLNFSGCGPMFGLGLKFVDPNARHVWLKPTHSYHDKKSTGKEPQFYPNWTAFVNAQCVRNQGPEPMHLRHWVTEYHVDGFRFDLASALCRGIDGSPLNAPPLIRAIAKDAVLSRCKIIAEPWDCGGLYLVGSFPNWDRWAEWNGKYRDDVRKFIKGDSGVKGSFATRVAGSSDLYRMNKRRPYHSINFVIAHDGFTLRDLVSYNFKHNEANGEGGYDGSNDNFSWNCGFEGETDDASIKALRARQMKNFHLALMISQGTPMMLMGDEYGHTRNGNNNSYGHDTAINSFLWDQLDARKSDHFRFFSKVIKYRHAHEVFSHESFLSKNDITWHEDHWDNHDSKFLAFTLHDRSGGDIYLAFNAHDYFIKVLLPTPPEKRKWQRVVDTNLKSPDDFVHDGVPSVGNTYNIAPYSSILLEAKF 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01143 833 PANTHER GLYCOGEN DEBRANCHING ENZYME 482 832 - -
Spst9g01143 833 CDD E_set_GDE_Isoamylase_N 111 221 IPR044505 -
Spst9g01143 833 SUPERFAMILY E set domains 107 244 IPR014756 -
Spst9g01143 833 SUPERFAMILY (Trans)glycosidases 239 732 IPR017853 -
Spst9g01143 833 Gene3D Immunoglobulins 92 229 IPR013783 -
Spst9g01143 833 Pfam Alpha amylase, catalytic domain 288 685 IPR006047 GO:0005975
Spst9g01143 833 Gene3D - 740 833 IPR013780 -
Spst9g01143 833 CDD AmyAc_Glg_debranch 240 728 - -
Spst9g01143 833 SUPERFAMILY Glycosyl hydrolase domain 739 832 - -
Spst9g01143 833 Gene3D Glycosidases 239 739 - -
Spst9g01143 833 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 112 210 IPR004193 GO:0004553|GO:0005975
Spst9g01143 833 SMART aamy 267 716 IPR006047 GO:0005975
Spst9g01143 833 Pfam Alpha amylase, C-terminal all-beta domain 749 830 IPR006048 GO:0003824|GO:0005975|GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01143 Spst-Chr9 10461820 10476542 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01143 12 832 Glycoside Hydrolase AT4G09020 65.338 0.0 1085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01143 K01214 - gmx:100806342 1414.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01143 9 10461820 10476542 Spst9g01143 9 10461820 10476542 ECH