Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01131 ATGACAATTCCACGCCTACGCCACGGCTTCATTGTCATCATTCTCCGACGAGGCATTAGGGCTCACCATAATCAGAATCTCTGGCAAATCGCCGCCCCCTCCATCTTCACCCGCCTCGCCATGTTTTCCATCACCGTCGTCACCCAGTCCTTCGCCGGTCACCTCGGCGACCTCGACCTCGCGGCCATTTCCATCGCCTGTACCGTTCTCATCTCCATAACCTTAGGTTTCATGTTGGGTATGGCGAGTGCGCTTGAGACGCTATGCGGCCAAGCCTACGGCGCCGGACAGCACCGCATGTTGGGCGTTTACCTGCAACGCTCGTGGGTGGTTCTGTCCCTGTCCTCGATTCTGATGCTGCCGGTGTTCGTGTTCGCTACCCCGCTGTTGATGTTGGTGGGGCAGCCCATCGCGGTGGCGGAGCAGGCGGGGCTGGTGGCGATCTGGTTGATTCCGTTTCACCTCAGTTTCCCGTTTCAGTTCACATTGCAGCTGTTCCTGCAGTGCCAGTTGAAGACCGGTATCGTTGCTTGGGTTTCAGGGGTGGCCCTTGCGATTCATGTTTTAATTAGTTGGATATTTGTTTATAGGATGAAAATAGGGATCGTTGGCGCTGCACTTTCCATTGGTTTCTCGTGGTGGCTCTCGGTTTTGGGAATGCTCGGCTATACACTCTTTGGTGGGTGCCCGCGTTCGTGGACTGGTTTTTCTGCTGAAGCTTTTGTTGGTCTCTGGGAATTCTTTAAATTCTCTTTGGCTTCTGGGGTCATGCTTGCGTTAGAGAATTTCTATTACAGACTCTTGCTTATAGTATCCGGATATATGCATAACACTGAGATCGCAATTGATGCTCTTTCTGTTTGTGTGACGATATATGGCTGGGAATCCATGATACCGCTTGCATTTTTGGGTGCAACCGGGGTTCGTGTTGCAAACGAGCTTGGCGCAGGCAATGCAAAAGGTGCAAAATTTGCAACTGTGGTTTCTGTGGCAAATACTGTACTTGTGGGACTTATATTTTGGTTGGTAATTGTGTTCTTCAACAAGAATCTTGCCCTGATCTTTACATCGAGCTCCTCCGTCATCCAAATGATCAATGAACTGGCAATGTTGTTAGCTTTTACTGTTCTTCTTAATTGCATTCAACCAGTTCTTTCAGGGGTGGCAGTAGGGTCTGGTCGTCAAGCAGTAGTGGCATATATAAACATTGGCAGTTACTACTTGGTTGGAATACCTCTTGGGGTTCTCTTAGGCCGGTTGCTTCCTTCGGGTATTGTTCAGGGAATGTGGAGTGGAATGATGAGTGGAACAGTGGTTCAAACATTGACCTTGGCTATTATTACGATGAGATATGATTGGGAAAAAGAGGTATCTAATGCTTTTCAACGCTTGGACATGACATGGAATGGAACGGTTCTGTTTTAA 1425 0.4898 MTIPRLRHGFIVIILRRGIRAHHNQNLWQIAAPSIFTRLAMFSITVVTQSFAGHLGDLDLAAISIACTVLISITLGFMLGMASALETLCGQAYGAGQHRMLGVYLQRSWVVLSLSSILMLPVFVFATPLLMLVGQPIAVAEQAGLVAIWLIPFHLSFPFQFTLQLFLQCQLKTGIVAWVSGVALAIHVLISWIFVYRMKIGIVGAALSIGFSWWLSVLGMLGYTLFGGCPRSWTGFSAEAFVGLWEFFKFSLASGVMLALENFYYRLLLIVSGYMHNTEIAIDALSVCVTIYGWESMIPLAFLGATGVRVANELGAGNAKGAKFATVVSVANTVLVGLIFWLVIVFFNKNLALIFTSSSSVIQMINELAMLLAFTVLLNCIQPVLSGVAVGSGRQAVVAYINIGSYYLVGIPLGVLLGRLLPSGIVQGMWSGMMSGTVVQTLTLAIITMRYDWEKEVSNAFQRLDMTWNGTVLF 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01131 474 Pfam MatE 255 415 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst9g01131 474 Pfam MatE 33 193 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst9g01131 474 NCBIfam MATE family efflux transporter 33 421 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst9g01131 474 PANTHER MULTIDRUG RESISTANCE PROTEIN 25 453 - -
Spst9g01131 474 CDD MATE_eukaryotic 25 459 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01131 Spst-Chr9 10359705 10373917 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01131 K03327 - gmx:100814869 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01131 9 10359705 10373917 Spst9g01131 9 10359705 10373917 ECH