Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01093 ATGGTTTCCACAGCCACGCTGTGTTCGAGCTTCATTTCAGGACCTTCATCCTCCTCCCGCTACTCTCTCTCTGCGACTCCATCCTACTGTGCATTTCCTCCTCGCAGGATCACCACGCCAAGAATGGGATCATCTCCGACCCAGGCCCAGGCCCATGCCCAAGCCCACTTAAAGGAGGCCAAGCTCTGGGGCGGCAGGTTCAAGGAGGGCGTAACCGACGCCGTGGAGAGGTTCACGGAGTCGATCTCCTTCGACAAACAGCTCTACAAGCAAGACATAATGGGAAGCAGAGCGCATGCGTCAATGCTCGCTCACCAGGGGTTGATAAGCGCGAGCGACAGAGACTCCATTCTGGAAGGTTTGGATGAAATAGAGAGGCGCATTGAGAGTGGAGAGTTCAATTGGAGAGCTGACAGAGAGGACGTGCACATGAACATCGAGGCTGCGCTTACTGACATAATCGGTGAGCCTGCGAAGAAGCTCCACACCGCTCGGAGTAGAAACGATCAGGTATTGACTGATTTTCGCCTCTGGTGTCGCGACGCCATCGACGGGATCCTCGTGAGCATGAAGCAGCTTCAGGTGTCGCTGCTGACCCTGGCTTTGAGGAACGAGGGTCTAATTGTTCCTGGTTACACTCACTTGCAGCGCGCACAGCCGGTTTTGCTGCAGCATCTTCTCTTGGCTTATGTTGAGGAGATTGAGCGTGATGCTGGGCGTTTGGTAGATTGTAGAGCTAGGATGAATTTCTGCCCCTTAGGGGCTTGTGCCTTGGCTGGTACAGGGCTTCCCATTGATCGATTCATGACTTCAGAAGCTTTGGGATTTACGGCTCCCTTGAGGAATAGTATAGATGCAGTTTCCGACCGAGATTTTGTACTGGAGTTTCTTTCTGCTAATGCCATCACAGCTGTGCATCTTTCTCGGCTTGGTGAAGAGTGGGTATTGTGGGCTTCGGAGGAATTTGGATTTATCACACCAAGCGACTCTGTTTCAACTGGAAGTAGTATCATGCCTCAGAAAAAGAATCCAGATCCAATGGAACTTGTTCGAGGGAAGTCTGCTAGAGTCATAGGGGATCTGGTTACACTTCTCACATTGTGCAAAGGTCTTCCTCATGCTTACAACCGTGATTTGCAGGAAGACAAAGAACCAGTATTTGACAGCGTTAAAACTATCTTGGGTATGCTCGAGGTATCAGCAGAATTTGCTCTAAACATTACTTTCAATCAGGAAAGAATACAAAAGGCATTACCTGCTGGTCATCTTGATGCAACCACACTTGCTGATTATCTTGTGAATAAGGGTGTGCCATTTAGAACGTCTCATGATATTGCTGGAAAATCTGTTGCTTTATGTACATTGAAGAATTGCCAACTGCTGGACTTAAGTCTTGATGAGCTGCGAAGTATAAATCCAGTATTTGAAGAGGACGTGTATGATTTTCTTGGAGTAGAAAATGCGATCCAGAAATTTGTGTCTTACGGCTCCACTGGGTCAGCATGTGTTGCCAGCCAAATTGACTATTGGATGAAAAAACTTGAAATGAAGTGA 1554 0.4839 MVSTATLCSSFISGPSSSSRYSLSATPSYCAFPPRRITTPRMGSSPTQAQAHAQAHLKEAKLWGGRFKEGVTDAVERFTESISFDKQLYKQDIMGSRAHASMLAHQGLISASDRDSILEGLDEIERRIESGEFNWRADREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDGILVSMKQLQVSLLTLALRNEGLIVPGYTHLQRAQPVLLQHLLLAYVEEIERDAGRLVDCRARMNFCPLGACALAGTGLPIDRFMTSEALGFTAPLRNSIDAVSDRDFVLEFLSANAITAVHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPHAYNRDLQEDKEPVFDSVKTILGMLEVSAEFALNITFNQERIQKALPAGHLDATTLADYLVNKGVPFRTSHDIAGKSVALCTLKNCQLLDLSLDELRSINPVFEEDVYDFLGVENAIQKFVSYGSTGSACVASQIDYWMKKLEMK 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01093 517 Hamap Argininosuccinate lyase [argH]. 61 512 IPR009049 GO:0004056|GO:0042450
Spst9g01093 517 Gene3D - 81 288 IPR024083 -
Spst9g01093 517 PRINTS Fumarate lyase superfamily signature 206 224 IPR000362 -
Spst9g01093 517 PRINTS Fumarate lyase superfamily signature 161 179 IPR000362 -
Spst9g01093 517 PRINTS Fumarate lyase superfamily signature 290 317 IPR000362 -
Spst9g01093 517 PRINTS Fumarate lyase superfamily signature 334 350 IPR000362 -
Spst9g01093 517 FunFam Argininosuccinate lyase chloroplastic 288 445 - -
Spst9g01093 517 Pfam Lyase 65 359 IPR022761 -
Spst9g01093 517 CDD Argininosuccinate_lyase 81 514 IPR009049 GO:0004056|GO:0042450
Spst9g01093 517 SUPERFAMILY L-aspartase-like 62 514 IPR008948 GO:0003824
Spst9g01093 517 FunFam Argininosuccinate lyase 420 491 - -
Spst9g01093 517 Gene3D Fumarase/aspartase (Central domain) 178 507 - -
Spst9g01093 517 Gene3D - 419 491 - -
Spst9g01093 517 FunFam Argininosuccinate lyase 60 165 - -
Spst9g01093 517 ProSitePatterns Fumarate lyases signature. 334 343 IPR020557 GO:0003824
Spst9g01093 517 PRINTS Argininosuccinate lyase family signature 201 221 - -
Spst9g01093 517 PRINTS Argininosuccinate lyase family signature 160 182 - -
Spst9g01093 517 PRINTS Argininosuccinate lyase family signature 334 350 - -
Spst9g01093 517 PRINTS Argininosuccinate lyase family signature 369 388 - -
Spst9g01093 517 PRINTS Argininosuccinate lyase family signature 252 268 - -
Spst9g01093 517 PRINTS Argininosuccinate lyase family signature 290 314 - -
Spst9g01093 517 NCBIfam argininosuccinate lyase 62 512 IPR009049 GO:0004056|GO:0042450
Spst9g01093 517 PANTHER ARGININOSUCCINATE LYASE 21 516 IPR009049 GO:0004056|GO:0042450
Spst9g01093 517 Pfam Argininosuccinate lyase C-terminal 424 489 IPR029419 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01093 Spst-Chr9 9782924 9787353 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01093 K01755 - gmx:100796544 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01093 9 9782924 9787353 Spst9g01093 9 9782924 9787353 ECH