Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01082 ATGCGTCCATTGGTCCCCAAAGGAAGAATCACCAGAAGAAGCATGACATGTCTATGCTTTACCCATTCACTCACTCAAACGCATAGCCTACCTCGCGCCACCACCTTCTCCTCTTCTCTCCACCACAACCGCAACCCCCTCTTTCAATTTTTCTCCGGTATTCTCCGTTCTCCAATTCGGAATTTTTCCACTAACTTCAGGGGCGGCCCTACACCGGTTGCTTCTTCTTCTGCACTTATGGCCGATTTCGACGCAGATTCTGTCACTTACCTCACTCAGCGAGAAGCCGCTGAGATCGACGAGACGCTCATGGGTCCTCTCGGCTTCAGTGTCGACCAGCTCATGGAGTTGGCTGGTTTGAGCGTCGCTGCTTCCATTTCTGAGGTTTACAAACCAAGTGAGTATAGTCGTGTTCTTACTATATGCGGTCCTGGTAACAATGGTGGTGACGGTTTAGTAGCTGCTCGCCACCTGCATCACTTTGGTTATAAGCCCTTTGTCTGCTACCCAAAGCGTACCCCCAAACCTCTCTATGCTGGATTAGTTACTCAGCTTGAAGCACTTTCAATCCCATTCTTGTCAGTCGAAGAACTACCGTCAGATATTTCAAATGACTTTGACATTCTTGTAGATGCGATGTTTGGATTCTCATTTCATGGTTCTCCTAGGCCTCCTTTTGATGATTTGATCCAGAGACTTGTCTCTTTACATGATAATAATGCAATTGGCCAAAAAAGATCTGTTATAGTCTCTGTAGATATTCCCTCTGGGTGGCATGTTGAAGAGGGAGATGTTGATGGTACAGGCATTAAACCTGATATGTTGGTTTCTCTGACAGCCCCAAAATTAGGTGCGAAGAAGTTCGTTGGTCCTCACCACTTTCTAGGAGGTAGATTTGTCCCACCTGCTATTGCTGAAAAATATAAGCTTATACTTCCACCTTATCCTGGAGCATCCATGTGCGTTCGAATTGGAAAGCCTCCACGAATTGATATCTCAGCTCTAAGAGAGAATTATATCTCTCCAGAATTTCTCGAAGAGCAGGTGGAGGCTGACCCTATTAACCAGTTTCGCAAATGGTTTGATGAAGCGATGGCTGCTGGTTTGAAGGAACCAAATGCCATGGCCTTGTCAACTGTAGGGAAGGATGCAAAACCCTCATCACGAATGGTATTGCTAAAAGGCTTGGATAATGATGGATTTGTGTGGTACACAAACTATGAGAGTCGGAAGGCACGTGAGTTATCTGAAAATCCACAGGCATCACTTCTTTTTTACTGGGATGGTTTAAATCGACAGGTACGGGTGGAAGGGCCTGTTCAGAAAGTCTCTGAAGAGGAATCAGAACAATATTTCCATAGCCGTCCAAGAGGAAGTCAGATTGGAGCAATAGTTAGCAAGCAGAGTTCTGTGGTACCTGGTAGGCATGTTCTTTATCAGGAGTACAAAGAGCTGGAACAAAAATACGCTGATGGAAGTTTGATCCCTAAACCTAACTGGGGAGGATATAGACTCACACCACAACTCTTCGAGTTTTGGCAAGGACAGAAATCTCGTTTGCATGACAGGTTGCAATATACTCCCCATGAGATCAATGGACAGCGGCTGTGGAAGGTTGAGCGGTTGGCTCCCTAA 1635 0.4581 MRPLVPKGRITRRSMTCLCFTHSLTQTHSLPRATTFSSSLHHNRNPLFQFFSGILRSPIRNFSTNFRGGPTPVASSSALMADFDADSVTYLTQREAAEIDETLMGPLGFSVDQLMELAGLSVAASISEVYKPSEYSRVLTICGPGNNGGDGLVAARHLHHFGYKPFVCYPKRTPKPLYAGLVTQLEALSIPFLSVEELPSDISNDFDILVDAMFGFSFHGSPRPPFDDLIQRLVSLHDNNAIGQKRSVIVSVDIPSGWHVEEGDVDGTGIKPDMLVSLTAPKLGAKKFVGPHHFLGGRFVPPAIAEKYKLILPPYPGASMCVRIGKPPRIDISALRENYISPEFLEEQVEADPINQFRKWFDEAMAAGLKEPNAMALSTVGKDAKPSSRMVLLKGLDNDGFVWYTNYESRKARELSENPQASLLFYWDGLNRQVRVEGPVQKVSEEESEQYFHSRPRGSQIGAIVSKQSSVVPGRHVLYQEYKELEQKYADGSLIPKPNWGGYRLTPQLFEFWQGQKSRLHDRLQYTPHEINGQRLWKVERLAP 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01082 544 NCBIfam NAD(P)H-hydrate epimerase 93 287 IPR004443 -
Spst9g01082 544 ProSitePatterns Pyridoxamine 5'-phosphate oxidase signature. 510 523 IPR019740 GO:0016638
Spst9g01082 544 Pfam Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 500 544 IPR019576 -
Spst9g01082 544 SUPERFAMILY YjeF N-terminal domain-like 89 318 IPR036652 -
Spst9g01082 544 Hamap Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 338 544 IPR000659 GO:0004733|GO:0008615|GO:0010181
Spst9g01082 544 FunFam NAD(P)H-hydrate epimerase 346 544 - -
Spst9g01082 544 ProSiteProfiles YjeF N-terminal domain profile. 96 312 IPR004443 -
Spst9g01082 544 Gene3D - 343 544 IPR012349 -
Spst9g01082 544 NCBIfam pyridoxamine 5'-phosphate oxidase 352 544 IPR000659 GO:0004733|GO:0008615|GO:0010181
Spst9g01082 544 Gene3D - 87 328 IPR036652 -
Spst9g01082 544 FunFam NAD(P)H-hydrate epimerase 88 329 - -
Spst9g01082 544 PANTHER PYRIDOXINE-5-PHOSPHATE OXIDASE 331 544 IPR000659 GO:0004733|GO:0008615|GO:0010181
Spst9g01082 544 Hamap NAD(P)H-hydrate epimerase [nnrE]. 92 327 IPR004443 -
Spst9g01082 544 Pfam Pyridoxamine 5'-phosphate oxidase 361 447 IPR011576 -
Spst9g01082 544 SUPERFAMILY FMN-binding split barrel 346 544 - -
Spst9g01082 544 Pfam YjeF-related protein N-terminus 112 284 IPR004443 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01082 K23998 - gmx:100795497 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01082 9 9602385 9608217 Spst9g01082 9 9602385 9608217 ECH