Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01060 ATGGAGGCTAAGTTGGGCATTGTCTTACTTGTGTCTGTAGTTTGGTTGATGAGGGGCAATGCCATTGACCCTTGTGCCTCTCAACCGGATGAGTCGGACCTAAACGTCATTCCCATTTACAGCAAATGCTCACCGTTCAAGCCACCCAAGGCAGACTCGTGGGACAACAGAATTGTAACCATGGCCTCAAAAGACCCACTCCGGGTCAAGTACTTGTCCACCTTGTTGCCCCAGAAGACCGTCTCCTCGGCCCCTATCGCTTCGGGCCAGGCCTTCAACATCGGTAACTACGTGGTCAGGGTTAAACTTGGAACCCCCGGTCAACTTTTGTTCATGGTTTTGGACACCAGCACCGACGAGGCCTTCGTCCCATGCTCAGGCTGCACGGGTTGTTCCGACACCACCTTCTCCCCCAAAGCCTCCACCAGCTACGGCCCATTGGACTGCTCCGTCCCCCAGTGCGGTCAGGTCCGTGGCCTTTCCTGCCCCGCCACGGGAACCGGCGCATGCTCCTTCAACCAATCCTACGCCGGCTCCTCTTTCTCCGCCACGCTTGTCCAAGACTCCCTCAGGTTAGCCACTGATGTTATCCCCAACTACTCCTTCGGCTGCGTCAACGCCATCTCCGGGGCCTCAGTGCCGGCCCAAGGGCTTTTGGGACTGGGCCGCGGCCCATTGTCGCTTCTCTCCCAGTCCGGGACAAACTACTCCGGTGTATTCTCTTACTGCCTCCCCAGCTTCAAATCGTACTACTTCTCCGGGTCGCTCAAACTCGGGCCCGTGGGCCAGCCCAAGAGCATCCGGACCACCCCGCTTCTGCGTAACCCCCACCGGCCTTCTCTCTACTACGTAAACTTCACCGGAATCAGCGTGGGGCGCGTCCTCGTGCCTTTCCCCAGCGAGTATCTCGAGTTTAACCCGAATAACGGATCCGGAACCATAATTGATTCGGGCACGGTGATAACCCGGTTCGTGGAGCCCGTGTACAACGCGGTGAGGGAGGAGTTCAGGAAGCAGGTGGGAGGCACGTTCTCGAGCATTGGGGCATTCGACACGTGTTTTGTGAAGACGTACGAAACACTGGCACCGCTAATTACTCTTCACTTCGAGGGATTGGACCTGAAGCTGCCATTGGAGAACAGCTTGATTCATAGCAGTGCCGGGTCACTGGCTTGTCTTGCGATGGCGGCGGCGCCGGATAATGTGAACTCGGTGTTGAACGTCATTGCCAACTTCCAGCAACAGAATCTTCGGATTTTGTTTGATACCGTGAATAATAAGGTTGGCATAGCCCGTGAGGTTTGTAACTAG 1311 0.5629 MEAKLGIVLLVSVVWLMRGNAIDPCASQPDESDLNVIPIYSKCSPFKPPKADSWDNRIVTMASKDPLRVKYLSTLLPQKTVSSAPIASGQAFNIGNYVVRVKLGTPGQLLFMVLDTSTDEAFVPCSGCTGCSDTTFSPKASTSYGPLDCSVPQCGQVRGLSCPATGTGACSFNQSYAGSSFSATLVQDSLRLATDVIPNYSFGCVNAISGASVPAQGLLGLGRGPLSLLSQSGTNYSGVFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRNPHRPSLYYVNFTGISVGRVLVPFPSEYLEFNPNNGSGTIIDSGTVITRFVEPVYNAVREEFRKQVGGTFSSIGAFDTCFVKTYETLAPLITLHFEGLDLKLPLENSLIHSSAGSLACLAMAAAPDNVNSVLNVIANFQQQNLRILFDTVNNKVGIAREVCN 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01060 436 FunFam Aspartyl protease AED3 260 436 - -
Spst9g01060 436 Pfam Xylanase inhibitor N-terminal 97 259 IPR032861 -
Spst9g01060 436 Pfam Xylanase inhibitor C-terminal 282 431 IPR032799 -
Spst9g01060 436 PANTHER ASPARTYL PROTEASES 9 429 IPR001461 GO:0004190|GO:0006508
Spst9g01060 436 Gene3D Acid Proteases 260 436 IPR021109 -
Spst9g01060 436 SUPERFAMILY Acid proteases 90 435 IPR021109 -
Spst9g01060 436 Gene3D Acid Proteases 76 259 IPR021109 -
Spst9g01060 436 ProSiteProfiles Peptidase family A1 domain profile. 97 431 IPR033121 -
Spst9g01060 436 FunFam aspartyl protease AED3 76 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01060 Spst-Chr9 9440336 9441646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01060 88 436 Miscellaneous Gene Families AT1G77480 26.923 1.08e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01060 - - gmx:100816307 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01060 9 9440336 9441646 Spst9g01060 9 9440336 9441646 ECH