Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01048 ATGGCAGCCGTGTCCGATCAGGCCACTAGTGTATGCACTCACTGTGATCGGGCCATCCCTTCAGCAAATATTGATTTGCATTATGCTCATTGCTCTCGGAACCTTGAAAGATGCAAAAATTGTTTAGATATGGTTCCGAAAACACTTGCCGAGGAGCACTATTTGAACACACATGCCCCGGTTGCCTGTTCGCTGTGCAGTGAAACTATGGAACGTGATATTTTAGATATCCATAGAGATGAAAAGTGTCCTAAAAGGATGGTCACCTGTGAGTTCTGTGAGTTTCCTTTGCCGGCAATTGATCTGGCTGAGCATCAGGAGGTATGTGGGAATCGAACAGAACTTTGTCACCTTTGTAACAAATATGTTAGACTGCGTGAAAGATACAACCATGAAGATAGTTGCAATAGAATTCAAGAAAATTCTTCAGGGTCTTCAAGGTACGTAAGGCCAGTTGAAAGAGACGAAGGTCCTCGAAGAAGGCCGCAGAATGATTTCTCAAGAAAGCGTGTTTTTTTCACAATAGCAATCACCGGTATTGCTGTTATTCTGGGGTCTATATTTTTCCAGAGAAAGACAGATCTGAGCAATTTGCAATAA 600 0.4267 MAAVSDQATSVCTHCDRAIPSANIDLHYAHCSRNLERCKNCLDMVPKTLAEEHYLNTHAPVACSLCSETMERDILDIHRDEKCPKRMVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRERYNHEDSCNRIQENSSGSSRYVRPVERDEGPRRRPQNDFSRKRVFFTIAITGIAVILGSIFFQRKTDLSNLQ 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01048 199 ProSiteProfiles Zinc finger TRAF-type profile. 60 93 IPR001293 GO:0008270
Spst9g01048 199 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 1 193 - -
Spst9g01048 199 MobiDBLite consensus disorder prediction 149 163 - -
Spst9g01048 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 57 IPR013083 -
Spst9g01048 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 111 IPR013083 -
Spst9g01048 199 MobiDBLite consensus disorder prediction 136 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01048 Spst-Chr9 9355481 9364088 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01048 - - gmx:100306673 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01048 9 9355481 9364088 Spst9g01048 9 9355481 9364088 ECH