Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01028 ATGGCCGCTCCTACCAGGGATCAAGCCCTCTCTCTCCTCGCCGCGGCCAACAACCACGGCGACCTCACCGTTAAAACTTCATCGCTCAAACAGGCCAAGGACCTTCTTCTCTCCATCGACCCCTCTCTCGCCGCCGACCTTTTTCCTTACATGCTTGAGCTTCAATCTTCTCCCGAAAGCCTCGTTCGCAAATTGCTCATTCAGATAATTGAGGATATTGGTTTTAAAGCAGTTGAGCACACCCCTACGCTGATATCTGTACTATTAACATTTTTACGAGACAGTGATGTAATTGTTGTAAAGCAGTCTATTGTTAGTGGCACAAATATCTTCGTTAGTGTTTGTGAGGAGTTGATTGTGCAGTTTCAACAACGTGGTAAAGTTGAGAGGTGGCTAGAAGATACTTGGATGTGGATGCTTAAGTTCAAGGATGCTGTTTTTGGGATTGCTCTGGAGATAGGAGCTATAAGCACAAACATACAGATTGGCTTGTTCATGTCTAACACTTCCGTGACACTGACACCTCTGGGACATGTGTCAGATCCACCTCTTCAACCTGTTTCTGCCGGAATAAAGTTGCTGGCACTAAAATTCCTGGAAACATTTGTATCACTCTTTACATCTGACACCAGTGATACTGAGAAATTAGCCACAAAAGGAGCTAGACAAGCTGTTAATGTTTCGTGGTTGGTTGGTGGTCACCCTCACCCTGTTCTTGATCCAGTGGTGCTCATGTCAGATGCAAATAGGACTCTTGGCATTTTATTAAATTTGTTGCAGTCTGTTGGCAGTCTTCCTGGTTGCTTGACTATTACTGTTGTAAATTGTTCTACAAGAGATGGCCAGGGTTATTTGATTTTCTCTAGCAGTGGGATTATAGTGGTAGCAACAATTTCAGATGAGTTTGTATGTGCTGATCCACACTGTAGGGATTGGTTTGATCATTTTGTCTATGCTGTTAGGCTGATATGTGTGAAAATAATAAGCACTGACAAAGGCATACTTAACACTGGTACTGAGGACTGCCAGGGAAGTTTAGTGTTGCTCTGGTGTGTGGTTCTGTGGTGTATTTGGTTGGAAAGAAATGCTAGAGATTTCTCTGCTCCGGAGTCTTCTTTCAAGCTCATTTGGGATCTAAGTAGTTTCTACAGTTTCTTTGTGATGCTCCGCCAATGTTTGGCAGCCATTGCAAGGAAAAGGCCACAACACTATGATACTATTCTTTCAGCGTTGCTTGATTTTGATCTAAATTTTCAAACAACGAAAGGATGTCATGTTGCTAGTATTCAGTACTCCATAAGAACAGCTTTTTTGGGATTTCTTAGGTGCACTTATTCACCAATACTAGAGTCAAGAGAAAGACTAATAAGGAGCCTGCGAGCTATGAATGCGGGGGAAGCTGCCGATCAGGTCATTCGGCAAGTCGACAAAATTATTAAAAATGGTGATCGTTCCACTCGCGATGTACGAGTTAGCAAGGATGATCAACCATCAACTCAGTCATCTGTTTCAGGGGAATTATCTAGAAAAAGACCCGTTCCTTTAGATAATGAACAATTGACCAATGGTCATGAAACCATCTCTAAGCGGATTCGTTCTGGCCCTGACTCTCATTCTACTTTACCAGCTCAAATAAATGATTCCGCACAAGATCTTAACTCTTTTAATGGAGTATCACCTAATGCTCCTGTGCTAGATAGCGAACTAACTGCTGTTGAGCAAATGATTGCTGTCATTGGTGCTTTACTTGCTGAAGGGGAGAGAGGTGCTGAATCTCTTGAAATCCTCATTTCAAAGATTCATCCAGATCTGTTGGCTGATATTGTCATAACTAATATGAAGCATCTGCCCAAGTTACCCCCACCACTAGCGAGAATTGGGAATTTACCAGTTGCTCGACAATTAAGCCCTCAAGTCAGTCAATCACAGGTTATTGCAGCTTCTATTCCAATAAATTCTGTCCAATCCTTGTCTGGTACTGCCCAAGCTTCATTGCCTTCAACTACGGCCACAGTCACTGCTACTGCTATTGCTACTACTTCATTGCCATCTGACACCTCTAATTTCACTAACCAGCCTGCTGATTCAAAACGTGATCCACGGCGGGATCCGCGGCGGCTGGATCCGCGGCGTGTTGTGGTAGCTTCTGGAGGATCAGCTGTATCAATTGCAGATGACATTGGGGCCACAAAATTAGAATTTGATGAACCTGTTTCTTCCATTAAGCCTGTTTTACTTCCTGTTGTTACTGCTGATGACAATACTCCATCAGATCTAACCGTCAAAATAAAAAATGATGATATGATCTCTGAAGGTTCCTCAGTTTCAGGACCTGATCTGGTAACCCCTAAAACAGACGTTCTGGAAAGGCCTGGAGATATCCATCGGACTACAGAAGCAGATACTTCCTTTGATCCCTCAGGCTCGTCTACTGATTTAAGAGAAGAGGATCTGAGTACGGTGAAGCTGTCAGATGATATTGAACCAATTGGGACAGATTCATCATCTGTTTCAGAGTTTGATCAGTTCTCCCTTGATGTTCAAGTTGAATCCACATTGGAAGATACCTGTCTGGAGTTACCACTGCTTCCACCTTATGTTGAACTATCCAAAGAACAGGAAATTAGGGTGAAAAACATGGCTGTTAGGCATATAATCAATTCATATAAACATTTGCATGGGACAGATTGTCAGCAGTTTTGGATGCCACTACTCGCTCGACTAGTTGCTCAGATTGATGATGATGAGGAGTTTAATAGGATGCTGCAAAAACACATCCTAGAAGACCATTGGCAAAAGGGGCATGAACTTATACTACATGTTTTGTACCATCTGCACTCCCTTATGATGTTGGATTCAGTTGGAAATGCTTCATCTTCTGCTGTTTTATATGAAAAATTTCTCTTGGGAGTGGCCAAAACTTTGTTGGATTCATTTCCAGCTTCTGACAAGTCTTTTAGTAGACTTCTTGGTGAAGTTCCACTTTTGCCTGAATCATCCTTGAAGATTTTGAATGATCTCTGCTATTCTGATGTGATTGGTCATGATGGAAAAAGTATCCGTGACATTGAACGTGTCACTCAAGGCCTTGGTGCTATCTGGAGTTTAATTTTGGGTCGTCCACAAAATCGCCAGGCCTGCTTAGGAATAGCATTGAAGCCTCTCAAAGATAGTCTAGTGGAAGTTGAGGTTGCTAGTTGCTTGTTAGCTTTTGTGCCCGAGACTCCCGCCAAGTTGGGTATGGGAAGAAGGCTTGCAGTCTTACCCTTGCGAGTAGAGGCTGTTTCTGGGATGAGATCCAGTGAAAAGCAAGCAACATTACTGTTATGTCAAGGCTTGCTTTCCACTTTCCAATACAGTTTTAAAAAGTTCTTGTGTGCTGTCCACCCACAGGATGAGATTCGAGCAAAAGCTATTCGGCTGGTTACAAACAAGCTCTTTCAGCTTAGTTACATATCAGGAGATGTTGAAAAATTTGCTACAAAAATGCTGTTTTCTGCTGTTGAACATGAGGTTTCAGATACAGGTCTTTTGCAATCTGGACCTACTGAACCAAGAGCCGAGGCAGAGGTTGAAGGCCATGAAATATGTACTACACAGGTTTCAGAGTCCACAGTTTCTGAAGATGACTCTGCTAGGGTCCAAAAACCATTGATTCAAAATGTTCCTTCTATATCATTTTCTGAAGCTCAACGCCTCATTTCTTTGTTTTTTGCTTTATGTACAAAGAAACCCAGTCTTCTTCAGATTGTATTTAGTGTGTATGGACAAGCCCCAAAATCTGTTAAACAGGTCTTTGTTGATTATGCTTTTCATCGTCATATTCCTATTGTTGTGAGGGCATTGGGGCAATCTTATTCTGAATTGCTCCGTATCATATCTGATCCACCACAAGGAAGTGAAAATCTCCTGACACTGGTATTGCAAATATTGACTCAGGACACAACACCATCTTCTGATTTAATATCTACTGTTAAACGTTTATATGAAACTAAATTTAGAGATGTTACAATTCTTGTTCCACTGTTGTCTTCACTTTCCAAACAGGAGGTTTTACCAATATTCCCAAGGCTTGTTGATCTTCCATTGGAAAAGTTTCAGAGAGCACTTGCTCACATACTACAGGGTTCAGCTCATACAGGTCCAGCTTTAACACCTGTAGAAGTGTTGGTTGCAATGCATGGAATTGTTCCAGAGAAGGATGGCCTTGCACTTAAGAAGATTACAGATGCTTGCTCGGCTTGTTTTGAGCAACGTACAGTGTTCACACAACAGGTTCTGGCAAAGGCATTGAACCAGATGGTTGATCAAACTCCGCTGCCTTTACTTTTCATGAGAACAGTTATTCAGGCAATTGATGCTTTTCCTGCACTGGTTGATTTTGTTATGGAGATACTCTCAAAACTTGTGACAAGACAGGTGTGGCGTATGCCTAAACTTTGGGTTGGTTTCTTAAAATGTGTATATCAGACACAGCCTCGTTCTTTTCATGTGCTATTGCAGGTACTGCGTTCTCAACTTGCACAACACCTTCACTTTGACCTGAAGGAAAAGGTGGCAAAACTTCAATTGTTTGTGGAAGCACTGGAAGGAGGTGCCTTCCAGTTGTACCAACAATGGGAAGTTTTAGATCTTCTGTTTGATCCAAGAAATGGAGCCTGA 4662 0.4217 MAAPTRDQALSLLAAANNHGDLTVKTSSLKQAKDLLLSIDPSLAADLFPYMLELQSSPESLVRKLLIQIIEDIGFKAVEHTPTLISVLLTFLRDSDVIVVKQSIVSGTNIFVSVCEELIVQFQQRGKVERWLEDTWMWMLKFKDAVFGIALEIGAISTNIQIGLFMSNTSVTLTPLGHVSDPPLQPVSAGIKLLALKFLETFVSLFTSDTSDTEKLATKGARQAVNVSWLVGGHPHPVLDPVVLMSDANRTLGILLNLLQSVGSLPGCLTITVVNCSTRDGQGYLIFSSSGIIVVATISDEFVCADPHCRDWFDHFVYAVRLICVKIISTDKGILNTGTEDCQGSLVLLWCVVLWCIWLERNARDFSAPESSFKLIWDLSSFYSFFVMLRQCLAAIARKRPQHYDTILSALLDFDLNFQTTKGCHVASIQYSIRTAFLGFLRCTYSPILESRERLIRSLRAMNAGEAADQVIRQVDKIIKNGDRSTRDVRVSKDDQPSTQSSVSGELSRKRPVPLDNEQLTNGHETISKRIRSGPDSHSTLPAQINDSAQDLNSFNGVSPNAPVLDSELTAVEQMIAVIGALLAEGERGAESLEILISKIHPDLLADIVITNMKHLPKLPPPLARIGNLPVARQLSPQVSQSQVIAASIPINSVQSLSGTAQASLPSTTATVTATAIATTSLPSDTSNFTNQPADSKRDPRRDPRRLDPRRVVVASGGSAVSIADDIGATKLEFDEPVSSIKPVLLPVVTADDNTPSDLTVKIKNDDMISEGSSVSGPDLVTPKTDVLERPGDIHRTTEADTSFDPSGSSTDLREEDLSTVKLSDDIEPIGTDSSSVSEFDQFSLDVQVESTLEDTCLELPLLPPYVELSKEQEIRVKNMAVRHIINSYKHLHGTDCQQFWMPLLARLVAQIDDDEEFNRMLQKHILEDHWQKGHELILHVLYHLHSLMMLDSVGNASSSAVLYEKFLLGVAKTLLDSFPASDKSFSRLLGEVPLLPESSLKILNDLCYSDVIGHDGKSIRDIERVTQGLGAIWSLILGRPQNRQACLGIALKPLKDSLVEVEVASCLLAFVPETPAKLGMGRRLAVLPLRVEAVSGMRSSEKQATLLLCQGLLSTFQYSFKKFLCAVHPQDEIRAKAIRLVTNKLFQLSYISGDVEKFATKMLFSAVEHEVSDTGLLQSGPTEPRAEAEVEGHEICTTQVSESTVSEDDSARVQKPLIQNVPSISFSEAQRLISLFFALCTKKPSLLQIVFSVYGQAPKSVKQVFVDYAFHRHIPIVVRALGQSYSELLRIISDPPQGSENLLTLVLQILTQDTTPSSDLISTVKRLYETKFRDVTILVPLLSSLSKQEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPALTPVEVLVAMHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPALVDFVMEILSKLVTRQVWRMPKLWVGFLKCVYQTQPRSFHVLLQVLRSQLAQHLHFDLKEKVAKLQLFVEALEGGAFQLYQQWEVLDLLFDPRNGA 1553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01028 1553 SUPERFAMILY ARM repeat 18 1442 IPR016024 -
Spst9g01028 1553 MobiDBLite consensus disorder prediction 682 710 - -
Spst9g01028 1553 MobiDBLite consensus disorder prediction 483 543 - -
Spst9g01028 1553 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1126 1511 - -
Spst9g01028 1553 MobiDBLite consensus disorder prediction 695 710 - -
Spst9g01028 1553 MobiDBLite consensus disorder prediction 795 815 - -
Spst9g01028 1553 Pfam Symplekin/PTA1 N-terminal 386 469 IPR032460 -
Spst9g01028 1553 Pfam Symplekin/PTA1 N-terminal 96 277 IPR032460 -
Spst9g01028 1553 Pfam Symplekin tight junction protein C terminal 1335 1511 IPR022075 -
Spst9g01028 1553 Gene3D - 338 492 IPR011989 -
Spst9g01028 1553 Gene3D - 1 286 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01028 Spst-Chr9 9178813 9204174 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01028 K06100 - tcc:18591877 1073.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01028 9 9178813 9204174 Spst9g01028 9 9178813 9204174 ECH