Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01026 ATGGCCTCGTTTCGGCGGACTCTATCGCCGGCGTATCCCGATCGCCAGTACCTAAACGGTTCGTTTCCGGTTTCCTCTCCGACGCACAAGCTACCCTCCGCGAACGCCAAGTACTCGTCTCCGCTGCCGGCGCTTTCGGCGGCGTTCCGGCGGCTCGTCGGCGGAGTGTTCACGCGCCGGCACGGACGGAAAGGCCAGTGGAGTCGAGCGGCGTTCAGGTGCGTGCTGTGCTTCTTCGTAGGGTTCTTGCTAGGCATGTTTCCATTCGGTCATGTGGCGGAGGACATTCGGTCTCACGAAATCTCGTTCGAGATGAAGCCGCCGCTGCCTCGCGCGAACAACGCGCAGCAACTGCTCCGGGAAGATCGCGTTCTACGGAATCGTGCCCAGGAGGGTTTCGTGATCGATCCGGTGAGCCTGAGCGCGGAGAGGGAGAGGCAAAACGATAGGTTCGATTTTGTGCCGAGGAAGCCGCTAATTGTGGTGACGCCAACGTACGACCGCGCCTTTCAGGCGTATTTCCTGAACCGGTTGGGGCAGGTGCTGCGGCTGGTGCCGCCGCCGGTGGTGTGGATTGTGGTGGAGATGAAGGCGGCGTCGATGGAGACTGCCGAGGTGCTGAGGAAGACGGGCGTGATGTATAGGCATTTGGTGTGCAATAAGAATGTGACAGATGTGAAGGACAGGGGGGTTCATCAGAGGAACACAGCGTTGGAACACATTGAGCATCATAGGCTCGATGGGATTGTTTACTTTGCGGACGATGATAATGTGTATTCTCTTGAGTTGTTTGACGCCTTGAGAGACATCAGCCGCATTGGCACTTGGCCTGTTGCCATGCTTGCACCAAGCAAGAACAAGGCCATTTTGGAGGGTCCTGTATGCAATGCAAGCCACGTGATTGGGTGGCATACAAATGAGAAAAGCAAAAGACTTCGTAGATTTCATGTTGATATGTCTGGATTTGCATTCAACAGCACAATCTTGTGGGATCCAAAACGATGGCGACGCCCTTCATCAAATCCCATAAGACAATTAGACACAGTGAAGGAAGGTTTTCAAGAGACTACCTTTATAGAACAGTTGGTGGAAGATGAAAGTCAAATGGAAGGTTCACCTCATGGTTGTTCAAAAATAATGAATTGGCATCTCCATTTGGGTGTTCATAATATTGTTTACCCAAAAGGTTGGGTGCTTCAGAAAAACCTAGACGCTGTCATACCTGTCAAGTAA 1233 0.5288 MASFRRTLSPAYPDRQYLNGSFPVSSPTHKLPSANAKYSSPLPALSAAFRRLVGGVFTRRHGRKGQWSRAAFRCVLCFFVGFLLGMFPFGHVAEDIRSHEISFEMKPPLPRANNAQQLLREDRVLRNRAQEGFVIDPVSLSAERERQNDRFDFVPRKPLIVVTPTYDRAFQAYFLNRLGQVLRLVPPPVVWIVVEMKAASMETAEVLRKTGVMYRHLVCNKNVTDVKDRGVHQRNTALEHIEHHRLDGIVYFADDDNVYSLELFDALRDISRIGTWPVAMLAPSKNKAILEGPVCNASHVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPSSNPIRQLDTVKEGFQETTFIEQLVEDESQMEGSPHGCSKIMNWHLHLGVHNIVYPKGWVLQKNLDAVIPVK 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01026 410 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 66 404 IPR005027 GO:0015018|GO:0016020
Spst9g01026 410 Pfam Glycosyltransferase family 43 178 385 IPR005027 GO:0015018|GO:0016020
Spst9g01026 410 SUPERFAMILY Nucleotide-diphospho-sugar transferases 158 403 IPR029044 -
Spst9g01026 410 CDD GlcAT-I 157 386 IPR005027 GO:0015018|GO:0016020
Spst9g01026 410 FunFam Glycosyltransferases 158 400 - -
Spst9g01026 410 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 158 403 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01026 Spst-Chr9 9169744 9173168 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01026 1 410 Glycosyltransferase AT1G27600 60.976 4.00e-179 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01026 K20869 - gmx:100809892 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01026 9 9169744 9173168 Spst9g01026 9 9169744 9173168 ECH