Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01024 ATGTGTAATCCCAAACCATCCTCGTCACCCCCATTTCTGTGTCCCACTAAAACCCACATCATAACTCCCGACCCCAAACTCATACATCACCCTTCCGTTGATGATCATCTTCAACATGAACTTCACAGATGGCCAACTCCCAACGAGGTGATAGAAGAAATGAAGGCCTTGGCGAAGATATCAGGGCCAACAGCACTGACGGGGTTACTCTTATATTCAAGAACCATGATCTCCATGCTCTTTCTCGGCTACCTCGGCGAGACGGAGCTCGCCGGAGGATCTCTCTCCATCGGCTTCGCCAACATCACCGGCTACTCCGTCATCTCAGGTCTTGCCATGGGAATGGAACCCATTTGCGGCCAAGCCTACGGCGCTAAACAATGGAAAACACTCGGCTTAACCCTCCAGAGAACCGTTCTCCTCCTCCTCTCCACCTCCATCCCCATCTCCCTCACCTGGCTCAACATGAAGTCCATCCTCTTATGGTGCGGCCAAGACCACCAGATATCCTCCACTGCACAAACCTTCATCCTCTTCTCCATCCCAGACCTTTTCCTCCTCTCCCTCCTCCACCCTCTCCGCATCTACCTTCGAACACAAAGCATCACATTACCCCTGACCTACTGCTCCGCTGTCTCCGTCCTCCTCCATGTCCCCCTCAACTTCCTCCTTGTGGTTCACTTCAAAATGGGGGTCTCCGGCGTCGCTATAGCCATGGTCTGGACCAACCTCAACCTCTTCCTCTTCCTCTCCTCCTTCGTCTACTTCTCCGGAGTCTACAAAGACTCGTGGGTCACCCCCATCTCCGACTGCCTCCGCGGCTGGTCCTCCCTACTTGCACTTGCGGTTCCCACATGCGTCTCTGTCTGCCTCGAATGGTGGTGGTACGAACTCATGATCATTCTCTGCGGGCTTCTCCTCAACCCCAAAGCCACCATTGCTTCCATGGGAATCCTCATCCAAACCACATCCCTCGTCTACGTCTTCCCCTCCTCCCTCAGCCTTGGCGTCTCCACCCGCGTCGGCAACGAGCTCGGCGCCAACCGCCCCGCCAGGGCCCGCATTTCCATGATAGTCTCGCTCGCCTGTGCCGTCGCGCTCGGCGTCGCCGCCATGGCTTTCACCACCCTCATGCGACACCGATGGGGCAGATTCTTCACTGCTGACGGAGAAATTCTTAACCTCACCGCCTCCGCGCTCCCCATCGTCGGCCTCTGCGAGCTCGGCAACTGCCCTCAGACCACGGGCTGCGGTGTCCTCCGTGGCAGTGCCAGGCCCACCGTCGGAGCCAACATCAACTTGGGCTCGTTTTACTTAGTGGGCATGCCCGTCGCTGTTGTTCTCGGGTTCGTTGCTAAAATGGGCTTTCCTGGGCTCTGGCTTGGGTTGCTTGCGGCCCAAGCCTCTTGCGCTTCTCTCATGATCTTCGTTCTCTGCACCACCGACTGGAACGCGCAAGTGCAAAGGGCCAATGAACTTACTTCTGCTAATTCTGCTCCTCCCAAATTACCCACTTCCTTCACTCCATCAACAACACACTCTAACCATCTTTCTCTTCCTGAGATTCTTCTCACCCATCATCACCTTCCCAACACTCCCTCTCTTGAAACAGACCCTCTCATTATACACTCCATACCTTAA 1641 0.5551 MCNPKPSSSPPFLCPTKTHIITPDPKLIHHPSVDDHLQHELHRWPTPNEVIEEMKALAKISGPTALTGLLLYSRTMISMLFLGYLGETELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQWKTLGLTLQRTVLLLLSTSIPISLTWLNMKSILLWCGQDHQISSTAQTFILFSIPDLFLLSLLHPLRIYLRTQSITLPLTYCSAVSVLLHVPLNFLLVVHFKMGVSGVAIAMVWTNLNLFLFLSSFVYFSGVYKDSWVTPISDCLRGWSSLLALAVPTCVSVCLEWWWYELMIILCGLLLNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGANRPARARISMIVSLACAVALGVAAMAFTTLMRHRWGRFFTADGEILNLTASALPIVGLCELGNCPQTTGCGVLRGSARPTVGANINLGSFYLVGMPVAVVLGFVAKMGFPGLWLGLLAAQASCASLMIFVLCTTDWNAQVQRANELTSANSAPPKLPTSFTPSTTHSNHLSLPEILLTHHHLPNTPSLETDPLIIHSIP 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01024 546 CDD MATE_eukaryotic 53 489 IPR045069 GO:0042910|GO:1990961
Spst9g01024 546 PANTHER MULTIDRUG RESISTANCE PROTEIN 49 483 - -
Spst9g01024 546 NCBIfam MATE family efflux transporter 63 460 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst9g01024 546 MobiDBLite consensus disorder prediction 494 514 - -
Spst9g01024 546 Pfam MatE 63 223 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst9g01024 546 Pfam MatE 284 447 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01024 Spst-Chr9 9152189 9154075 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01024 K03327 - gmx:100788339 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01024 9 9152189 9154075 Spst9g01024 9 9152189 9154075 ECH