Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01012 ATGAATAATCCTGATCAGTTTCAGAAAAATAGCATGTACGTAGAAACTCCAGAAGCTTTTGCTGATGCTAGCAAAGACTTTGACGATGATGGACGAGCCAAAAGAACTGGAACATGGATAACTGCGAGTGCTCATATCATAACGGCAGTTATAGGATCTGGAGTGCTGTCTCTTGCATGGGCAATTGCACAAATGGGTTGGGTGGCTGGTCCTGCGGTTCTCTTTGCCTTCTCTTTCATCACATACTTCACCTCCACTCTTCTTGCAGACTGTTACCGTTCACCTGACCCTGTTCATGGCAAGCGAAACTATACCTATTCCGACGTTGTCAAATCCATCTTAGGTGGGAGAAAGTTCCAGCTGTGTGGATTGGCTCAGTACATAAATCTGGTCGGTGTAACTATCGGATACACAATCACTGCTTCAATTAGTATGGTGGCGGTGAAGAGATCGAACTGTTTTCACAAACATGGTCACCATGATAAGTGCTACACCTCAAACAACCCTTTCATGATCCTCTTTGCTTGCATCCAAATCGTGCTTAGTCAGATACCAAATTTCCATAAGCTCTGGTGGCTTTCCATTGTTGCAGCAATTATGTCTTTTGCTTATTCTTCCATTGGACTCGGGCTCTCTGTAGCTAAAGTAGCAGGTGGGGGAGAACCTGTAAAGACAACCTTAACTGGAGTGCAAGTTGGAGTGGATGTTACAGGACCGGAGAAGGTGTGGAGGACGTTTCAAGCTATTGGTGACATTGCCTTTGCTTATGCTTATTCTAACGTTCTCATCGAGATACAGGATACCCTTAAATCAAGCCCTCCGGAGAACAAGGTCATGAGAAGAGCAAGCTTGATTGGCATCGTGACTACAACCTTGTTTTATGTGCTATGTGGCTGCCTAGGTTATGCAGCATTTGGAAACAATGCACCGGGAAATTTTCTCACTGGGTTCGGCTTCTACGAGCCCTTTTGGCTGATAGACTTTGCTAACATCTGCATAGCAGTGCACTTGGTTGGGGCATATCAGGTTTTCTGTCAGCCCATATTTGGGTTCGTAGAGAAGTGGAGTAAGGAAAGGTGGCCAAACAGCCAATTTGTTAATGAAGAGCACGCAGTGAATTTCCCAGTGTGTGGAACCTACTGTGTGAACTTTTTCAGGGTGGTGTGGAGAACAACATACGTGATCATCACTGCTTTGATAGCTATGATGTTTCCCTTCTTCAATGACTTCCTAGGACTGATTGGTTCACTCTCCTTTTGGCCATTAACCGTTTACTTCCCCATAGAGATGTACATCAAGCAGTCAAAGATGCAGAAGTTTTCCTTCACATGGACATGGCTCAAGATATTAAGCTGGGCGTGCTTGATTGTTTCGATTATTTCAGCAGCTGGTTCCATTCAAGGCCTCGCTCAAGATCTTAAGAAATACCAGCCCTTTAAAGCTCAACAATAG 1452 0.4456 MNNPDQFQKNSMYVETPEAFADASKDFDDDGRAKRTGTWITASAHIITAVIGSGVLSLAWAIAQMGWVAGPAVLFAFSFITYFTSTLLADCYRSPDPVHGKRNYTYSDVVKSILGGRKFQLCGLAQYINLVGVTIGYTITASISMVAVKRSNCFHKHGHHDKCYTSNNPFMILFACIQIVLSQIPNFHKLWWLSIVAAIMSFAYSSIGLGLSVAKVAGGGEPVKTTLTGVQVGVDVTGPEKVWRTFQAIGDIAFAYAYSNVLIEIQDTLKSSPPENKVMRRASLIGIVTTTLFYVLCGCLGYAAFGNNAPGNFLTGFGFYEPFWLIDFANICIAVHLVGAYQVFCQPIFGFVEKWSKERWPNSQFVNEEHAVNFPVCGTYCVNFFRVVWRTTYVIITALIAMMFPFFNDFLGLIGSLSFWPLTVYFPIEMYIKQSKMQKFSFTWTWLKILSWACLIVSIISAAGSIQGLAQDLKKYQPFKAQQ 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01012 483 Pfam Transmembrane amino acid transporter protein 35 469 IPR013057 -
Spst9g01012 483 PANTHER OS05G0424000 PROTEIN-RELATED 36 466 - -
Spst9g01012 483 FunFam Amino acid permease 6 32 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01012 Spst-Chr9 9034381 9037625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01012 8 481 Organic Solute Cotransporters AT5G49630 75.732 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01012 K24917 - gmx:100806335 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01012 9 9034381 9037625 Spst9g01012 9 9034381 9037625 ECH