Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00989 ATGGATGACGAGGAGAGAGAGAGGCTTCTGGAGAGGGAGAGATTGCAAATCCAAATGATTCACCAGCTCGATCTCGAGCACCTCGAAGTCGAAGAAGTCGATTACACCGATGAAGACGAAGAAGCCGACGAGGAATATGCGATTTTCCTTTCACAATTAAATTCGTCTAGTCCTCCACAATCTTCCGCTGAATTCACTTTCGACACCTATATCACGCCGTTGCATACGTATCTCGGTGATGTGGAAGACACTCGCCACAGGACTGCGTTCTTGGACGGTGGAGCTATATTGAACATTCCGCTTTTTTTCCTCCGAGGTATTGGAGTTGTACTCTTTCCAGGGGCTACTCTTCCCCTTAGAATTATTGAACCTCGTATGGTGGTTGCTGTGGAGAGAACTATAACTCCAGATGATATTCCTCAGACCATTGGCGTGATTCGAATTCACATGGATACTGCAACTCGAAGGATGAAATCAGCAAGCGTTGGGACAACTGCAGAGATTCGACAATTTCGGCGTCTGGGGGATGGTACACTGAATGTGGTTACCCGTGGACAACAAAGATTTCGCCTAAGACGGTCCTGGAATGACGTGGATGGAGTGGCTTATGGAGAGATCCAAATTATTGAGGAAGATCTGCCAGTGAGAACTCCAAGGGATGCCTTTGGCAAATTAGCACCATTGAGTAATATGCCCCGTAGCCAAGCTGTCTCATACACAGTGTCTTCACCAGATTCTCATGTTAAAATGCAAAGGTCAAAAAATGAGGAAAGTGATTCAGAAGCGAGTTTTGAGAGTGAGCTCTCATTGGTGGAAAGGAAAATCCATCTATCAGTTGTTGGCTCCAGTTATGTGCATGATACAATGGATGAATCTGCAAACATCAGCGGGGCAAAGTGTAAGTCAGATCAGGAAATTAGATCCAATCTGGATTCAAGGACTGGGAACTGTTCCACTTCTGGAAAACAGTCATCCAAAGAAGAGCTTAATAGATATAAAAATATATGTGCCTACCCATCTCATAAAATTTCTAAAGCATTTTGGCCCCACTGGACATATCGGATGTTTGACTCTTATTTGCTGGCACAAAGGGCTGCAGAAATGTGGAAGCAAATAGTTGGGGTGCCTAACATGGAAAGTCTCGTTAAAAAGCCTGATATTTTATCGTTTCACATAGCCAGTAAAATACCTGTGTCTGAGTCTACAAGGCAGGAGCTTTTGGACATTGATGGCATTGCATACAGACTGCGTAGGGAAATTGAATTACTAGAGAGCATTGATCTTATCCGCTGTAAAAGCTGTGAGAGTACAATTGCAAAACGAAGTGATATGCTGGTGATGTCAAGTGAGGGTCCTCTTAGTGCCTATGTGAATCCAGACGGTTATGTGCATGAGATAATGACTCTTTACAAGGCAAATGGTTTAGCTCTAATTGGACCAGCAGTAGCTGAATACAGTTGGTTTCCTGGGTATGCGTGGACAATTGCTACTTGTGCAACATGTAAAACCCAAATGGGGTGGCTTTTTACTGCCAGGAGCCAAAAACTGAAACCAAGCACTTTCTGGGGGATTCGGAGCTGTCAACTTGCAGAAGAAAAACGCGAAAACCTTTAG 1614 0.4418 MDDEERERLLERERLQIQMIHQLDLEHLEVEEVDYTDEDEEADEEYAIFLSQLNSSSPPQSSAEFTFDTYITPLHTYLGDVEDTRHRTAFLDGGAILNIPLFFLRGIGVVLFPGATLPLRIIEPRMVVAVERTITPDDIPQTIGVIRIHMDTATRRMKSASVGTTAEIRQFRRLGDGTLNVVTRGQQRFRLRRSWNDVDGVAYGEIQIIEEDLPVRTPRDAFGKLAPLSNMPRSQAVSYTVSSPDSHVKMQRSKNEESDSEASFESELSLVERKIHLSVVGSSYVHDTMDESANISGAKCKSDQEIRSNLDSRTGNCSTSGKQSSKEELNRYKNICAYPSHKISKAFWPHWTYRMFDSYLLAQRAAEMWKQIVGVPNMESLVKKPDILSFHIASKIPVSESTRQELLDIDGIAYRLRREIELLESIDLIRCKSCESTIAKRSDMLVMSSEGPLSAYVNPDGYVHEIMTLYKANGLALIGPAVAEYSWFPGYAWTIATCATCKTQMGWLFTARSQKLKPSTFWGIRSCQLAEEKRENL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00989 537 Gene3D Peptide methionine sulfoxide reductase. 422 537 - -
Spst9g00989 537 PANTHER CEREBLON 44 527 - -
Spst9g00989 537 Gene3D - 79 209 IPR046336 -
Spst9g00989 537 Coils Coil 25 45 - -
Spst9g00989 537 MobiDBLite consensus disorder prediction 300 324 - -
Spst9g00989 537 SMART lon_5 98 425 IPR003111 -
Spst9g00989 537 MobiDBLite consensus disorder prediction 249 263 - -
Spst9g00989 537 ProSiteProfiles Lon N-terminal domain profile. 99 425 IPR003111 -
Spst9g00989 537 ProSiteProfiles CULT domain profile. 426 533 IPR034750 -
Spst9g00989 537 SUPERFAMILY PUA domain-like 98 424 IPR015947 -
Spst9g00989 537 Pfam ATP-dependent protease La (LON) substrate-binding domain 99 424 IPR003111 -
Spst9g00989 537 FunFam Lon protease homolog 357 421 - -
Spst9g00989 537 CDD CRBN_C_like 429 525 IPR034750 -
Spst9g00989 537 MobiDBLite consensus disorder prediction 241 263 - -
Spst9g00989 537 FunFam Blast:Protein cereblon homolog 422 537 - -
Spst9g00989 537 ProSiteProfiles cAMP/cGMP binding motif profile. 201 237 IPR000595 -
Spst9g00989 537 Gene3D - 357 421 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00989 K11793 - gmx:100779918 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00989 9 8794163 8799540 Spst9g00989 9 8794163 8799540 ECH