Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00971 ATGGAATCTCATGCCTCCAATTCTAACTATCATTCTAACCATGACAGCAACAACAACCACCACCACCACCCTCGGTTCAAACCGAGCCAACCCATCTCAGACCGAATAGTCCGCGCCCTCCGCCACCGTCTCCGCCTCCTCCACCGTGCCGGCTCCACCTTCTTCATATTCGGCGCCACCGGAAACGTGTACACGGTCACCCTCTCCTCCACACCCTCATGCACCTGCCCTGACCGTACAACCCCATGCAAGCACATTCTCTTTGTTTTCATTCGAGTCTTGGGCGTGTCCCTCGATGATGTGTGTCTGAGGAGGAGGACTCTTCGTCCCTGCCAGCTCCAACGCCTCCTAGGCACGCCAACGTTGCCGGAGGCAGTGGCGGGTGGCACCCTCCGGCAGAGCTTCCACCAACTCTTCTTTCGTGGAAAGTCAACGAAGCCAAATATAGAGATGGAGGAGGGCGCCACCTGCCCCGTTTGCCTTGAGGAAATGGGGAAGGAGCAAAACCTGGTTGCATGTGGGACATGCCGTAACCCTATTCATGAAGAGTGCTTGATGAGGTGGAAGAGAACACGGGGAAGAAGAACAACTAGTTGTGTGATTTGTAGAGCGAGGTGGAGGGATAGGGTGGAGCAGGATAAGTATCTGAACCTGTCTGCGTATGTTAGTGAAGATGACATGGGAGAACCTGGTGGAGGACTCTGCACTGGCTGA 714 0.5504 MESHASNSNYHSNHDSNNNHHHHPRFKPSQPISDRIVRALRHRLRLLHRAGSTFFIFGATGNVYTVTLSSTPSCTCPDRTTPCKHILFVFIRVLGVSLDDVCLRRRTLRPCQLQRLLGTPTLPEAVAGGTLRQSFHQLFFRGKSTKPNIEMEEGATCPVCLEEMGKEQNLVACGTCRNPIHEECLMRWKRTRGRRTTSCVICRARWRDRVEQDKYLNLSAYVSEDDMGEPGGGLCTG 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00971 237 SUPERFAMILY RING/U-box 148 210 - -
Spst9g00971 237 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 138 212 IPR013083 -
Spst9g00971 237 ProSiteProfiles Zinc finger RING-type profile. 157 203 IPR001841 -
Spst9g00971 237 ProSiteProfiles Zinc finger SWIM-type profile. 64 94 IPR007527 GO:0008270
Spst9g00971 237 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 12 212 IPR039903 GO:0061630
Spst9g00971 237 MobiDBLite consensus disorder prediction 1 29 - -
Spst9g00971 237 Pfam Ring finger domain 156 203 IPR001841 -
Spst9g00971 237 Pfam SWIM zinc finger 64 92 IPR007527 GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00971 - - var:108321788 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00971 9 8615330 8616043 Spst9g00971 9 8615330 8616043 ECH