Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00961 ATGGCCACTTCATATAAAGCATTCCTAGTGAACTGCTCCATTCAGAAAGGACCCTCCAATGTCTCAGACAATTCTCGTCACTTCAACCTTCCACCCTTCGCTGCCTTTAAGCAGCCACCACTGAAGAAAATTCTGCCTAAAGTCCCTTCACAAATTGATGTTCAAAAGACTATGACAAACACTGCATCTAAATTGCTTAACGCCTTTGTAGATTCGTTCTTTGAATTTGTTGACCGACCACTGCTTCCATCTCAGAGTAACTTTGCTCCGGTGGAGGAGTTGGGTGAAGCCATATTTGTTACCAGCATCCAAGGACGAATTCCAGACGATTTTCCAGAGGGTGTCTACATTAGAAATGGGCCAAATCCACTTTTTGGAGGATTAAAATCAACTAAGTCTATCTTTGGGAGGTCAAGTCACATTTGGGTGGAAGGAGAGGGAATGCTTCACGCAATTTATTTTAAAAGGTCAAGTCAAGGGAGCTGGACGGTCCTTTACAACAACAAGCACGTTGAAACCGATACATACAAGATTGAAAAGCAACGAAGCAAACCATCGTTTCTACCGGCCATAGAAGGCGATTCACCGGCCATTTTGTGTGCTTATCTGCTAAATTGGTTGCGATTTGGCAAAGTAAACAAGTACATCAGCAACACCAATGTGTTTGAGCATTCAGGTAACTTTTACTCGGTTGCTGAAAATCACATCCCACAAGAGATTGATATCTTCAAACTAAAAACTCTAGGAAATTGGAATGTCAATGGCGACTGGGATCGTCCTTTTACCAGTCACCCAAAGAAGGCTCCAGGTACGGGGGAGCTAGTCACATTAGGTGTTGCAGCAACCAAACCTTTTGCCGTTGTTGGAATTATTTCTGCTGATGGAGAGAAATTGGTTCAAAAAGTTGATCTCGAACTAAATAGGTGCACTCTTTGCCATGACATTGGTGTTACTGAGAGGTACAATGTGATCATGGATTTTCCTCTAACTCTTGATATAAACAGACTTCTTAGAGGAGGCCAATTAATAAAGTATAATAAGGAGGAATACGCAAGGATTGGGGTACTGCCACGCTATGGTGATGCCAACTCAATCAAATGGTTTAAGGTGGAACCTAATTGCACGTTTCACATTATAAACTCTTTTGAGGATGGACACGAGGTTGTAGTGAGGGGTTGCAGATCTCTAGATTCACTAATTCCTGGACCTGACCCAAGTTTGAAGGAATGCGAGTGGTTATCTCGTTGTTACGAGTGGCGATTGAATATGGAGACAGGAGAAGTTAAGGAGAAAGATCTCTGTGGAGCCAACGTAGTTTATATGGATTTCCCTATGATCAATGGAAACTTCATAGGAATGAGGAATAGATATGCATACACCCAGATAGTCGATCCAATTGCAAGCTCTACTCAAGACGCACCAAAATATGGAGGTTTAGCAAAACTCTACTTTGAAGAATCATGTACACAGTTCTCCATGGGAAACAAAGAGCAAGCTGAAAAGCCTATAAGAGTGGAGTGCCATATGTTTGGGAAGAACACATTTTGCAGCGGGGCTGCCTTTGTCCCCAGAGATGGGGGTCTTGAAGAAGATGACGGTTGGATCATAGCTTTTGTTCACAATGAAGATATCAACATATCTGAAGTTCATATAATAGACACAAAGAAGTTCTGTGGTGAAATGGTTACCAAAATCACCCTGCCTCGCAGAGTACCATATGGATTTCATGGAGCTTTCATGCCAATTGCGTTTCAAGCACAGTAG 1764 0.4229 MATSYKAFLVNCSIQKGPSNVSDNSRHFNLPPFAAFKQPPLKKILPKVPSQIDVQKTMTNTASKLLNAFVDSFFEFVDRPLLPSQSNFAPVEELGEAIFVTSIQGRIPDDFPEGVYIRNGPNPLFGGLKSTKSIFGRSSHIWVEGEGMLHAIYFKRSSQGSWTVLYNNKHVETDTYKIEKQRSKPSFLPAIEGDSPAILCAYLLNWLRFGKVNKYISNTNVFEHSGNFYSVAENHIPQEIDIFKLKTLGNWNVNGDWDRPFTSHPKKAPGTGELVTLGVAATKPFAVVGIISADGEKLVQKVDLELNRCTLCHDIGVTERYNVIMDFPLTLDINRLLRGGQLIKYNKEEYARIGVLPRYGDANSIKWFKVEPNCTFHIINSFEDGHEVVVRGCRSLDSLIPGPDPSLKECEWLSRCYEWRLNMETGEVKEKDLCGANVVYMDFPMINGNFIGMRNRYAYTQIVDPIASSTQDAPKYGGLAKLYFEESCTQFSMGNKEQAEKPIRVECHMFGKNTFCSGAAFVPRDGGLEEDDGWIIAFVHNEDINISEVHIIDTKKFCGEMVTKITLPRRVPYGFHGAFMPIAFQAQ 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00961 587 PANTHER BETA-CAROTENE DIOXYGENASE 91 580 IPR004294 GO:0016702
Spst9g00961 587 Pfam Retinal pigment epithelial membrane protein 89 581 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00961 Spst-Chr9 8480938 8484595 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00961 - - gmx:100817738 1066.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00961 9 8480938 8484595 Spst9g00961 9 8480938 8484595 ECH