Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00960 ATGGAAATGAATATGGCAACTTCATACACTACTCATTGCTCCATTCAGAAAAGACCCTTTATCTTCCCACACCATCCTATTACTTTGGGACGTTCCTCAAACTTTAAGCTAAGAGCCATACCTCAAATTCCACTGCAAATCGATGCTTCCAAAACCATCTCACACATTAAAACCAAATTTCTTAACGCGATTGTGGATTCAGCCTTTGAGTTTGTCGACCAGCTATCGCTTCCATCTCAGAGTAACTTTGCTCCGGTGGAGGAATTAGAGGAAGCCATGGCTATCACTCACATTGAAGGCGACATACCAGATCATTTTCCAGAAGGTGTCTTCATTAGAAATGGACCAAATCCACTCTTTGGAGGATTGAAATCAACCAAGTCCATGTTGGGGAGGACAAAGAGTATTTGGGTGGAAGGAGAAGGAATGCTTCATGCTTTGTACTTCAAAAGGAAAAATGATGGGTGCTGCACCATCTTCTACAACAACAGATACGTTCAAACTGTAACATACAACCTTGAGAATCAAAGTACCAACCCATTGTTTCTCCCTGCCGTAAGAGGAGATTCATTGGCCGTTTTGTCTTCTATGCTTCTAAACTGGCTGAGATTTGGAAAACTAAATAAAGATTACAGCAACACCAATGTGTTTGAGCATTCAGGCAAGTTTTACTCGATTTCCGAGAATTACATCCCACAAGAGATTGACATCTTCACACTAAATACTGTAAGAGACTGGGATGTCAATGGCGCATGGAATCGTCCTTTTGCAAGTCATCCTAAGAAAATTCTCGGTACAGGAGAGCTGGTTATTTTTGGAGTAGATGCAACTAAACCTTATTTTGAAATTGGAATAGTTTCGGCTGATGGAAAGGAATTGGTTCATAAAGCAGACCTAAAACTAGACAGAAGCAGTTTATCCCATGAAATAGGTATCACAAGCAGGTATATAGTGATATTGGATTGTCCACTGATTGTAGATTCGAACAGACTACTCAGAAGAGGCCAATTAATCAAATACGAGAAGGAGAAATATGCCAGGATTGGGATAATGCCGCCCTATGGTGATGCTAACTCAATCCAGTGGTTTGAGGTGGAACCTAATAACACATTTCATATCATCAATTCCTTTGAGGATGGTCATGAGGTTGTGTTGTGGGGTTGCAGAGCACTAGATGCAATAATTCCAGGACCTGAAGATGGTCTGAAAGAATCCAAGTTTTTCTCTCGGTGTTATGAATGGAGATTAAACATGGTAAGCGGGGAGGTTAAGGAGAAATACCTCACTGGACCAGAACAGTTTATGGATTTTCCTGTAATTAATGCAAGTTTTACAGGAATTAAGAATAAATACGGATACACCCAAGTGGTTGATCCTACTGCAAGTTATGCTGCAGATATTCCTAAATACGGAGCTTTAGCGAAGCTATACTTCGAAGAACCATGTTCAGAATTCCCTTTGGGGGACACACAGGAAGAAGAGTTTATAAGGGTGGAATACCATAGGTTTGAAAAAAATGTATTTTGCACCGGATCTGCCTTTGTCCCTAAGGAAGGTGGTCTTGAAGAAGATGATGGTTGGATAATCACTTTTGTTCACAATGAAGATACCGGCATATCTCAAGTTCATATAATTGACACAAGGAAGTTTTCTGGAGAGGCAATTTCCAAAATTACAATGCCTTGCAGAGTTCCATATGGATTTCACGGAGCTTTCATGCCAATCTCATTTTAA 1734 0.4031 MEMNMATSYTTHCSIQKRPFIFPHHPITLGRSSNFKLRAIPQIPLQIDASKTISHIKTKFLNAIVDSAFEFVDQLSLPSQSNFAPVEELEEAMAITHIEGDIPDHFPEGVFIRNGPNPLFGGLKSTKSMLGRTKSIWVEGEGMLHALYFKRKNDGCCTIFYNNRYVQTVTYNLENQSTNPLFLPAVRGDSLAVLSSMLLNWLRFGKLNKDYSNTNVFEHSGKFYSISENYIPQEIDIFTLNTVRDWDVNGAWNRPFASHPKKILGTGELVIFGVDATKPYFEIGIVSADGKELVHKADLKLDRSSLSHEIGITSRYIVILDCPLIVDSNRLLRRGQLIKYEKEKYARIGIMPPYGDANSIQWFEVEPNNTFHIINSFEDGHEVVLWGCRALDAIIPGPEDGLKESKFFSRCYEWRLNMVSGEVKEKYLTGPEQFMDFPVINASFTGIKNKYGYTQVVDPTASYAADIPKYGALAKLYFEEPCSEFPLGDTQEEEFIRVEYHRFEKNVFCTGSAFVPKEGGLEEDDGWIITFVHNEDTGISQVHIIDTRKFSGEAISKITMPCRVPYGFHGAFMPISF 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00960 577 PANTHER BETA-CAROTENE DIOXYGENASE 91 573 IPR004294 GO:0016702
Spst9g00960 577 Pfam Retinal pigment epithelial membrane protein 84 574 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00960 Spst-Chr9 8473755 8478351 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00960 - - gmx:100817207 998.808