Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00954 ATGGCAAGGGAAACAGTGAAAACAGCCCAGACCATGAGCCCGAGAGCGTCTAACTCCAAGTGCTCAGTTCATGAGCTGGAGAACATAGATGAGAATGCTCCTGCAGATTGGACTGCATCATCCTGCCCCCCACCTGATACTCCGACTGAGTCAATGGAGTTCCTTGCCAGATCATGGAGTCTTTCAGCCATGGAACTCTCTAAAGCACTGCACAGCACCAACATTACGATCTCCACCGGTATAGAGATGCCACTTTCTTGCCCTTCAGGTCCCCAATTTGATACCAAGAGTTCCGCTGCTTCAAAGGATTTATCTAACGGTTGTTATCCTCCAATTTCACCAAGAGACAGTAGCGAAAAGAAGGATTTACTTTTGCTCCATCAGGCACTCAGTACAGAACTCCTTTCCAGTCAAAACTTGCTCAGAAATGGGCTTTACAGGAGCTTGCTAAGAGGGAGGACGATGGGTAGGTGGTTGAAAGATCAAAAGGAGAGGAAAAAGCAGGAAATTAGGACCCATAACGCTCATTTGCATGCTGCAGTATCTGTGGCTGGTGTTGCTGCTGCTATTGCAGCGGTTGCAGCATCAACAGCATCACCTGAATTGCCTTATGCCAACCATAAGAACCCTCCTCCCCTTGCTTCTGCTGCAATTGCATCTGCAGCAGCTTTAGTAGCCTCTCACTGCATTGAGATTGCAGAAGATATGGGAGCTGAACATGACCAAATATTAACAGTAGTCAACTCTGCCATTAATGCAAAGTCCAATGGAGATATAATGACTTTAACAGCCGGAGCAGCCACAGCCTTGCGAGGAGCTGCTACTCTAAAGGCAAGGCTGCAAAAGGGGCCTGGAGCAACTGCCATTCCTCTAGTTGAGGAAAAGTGTGATGAAAGCAGAGAAGCAAACATCTTGACAGCACTGGACCATGTCTTTAAAGGAGGAGATCTTCTCAAACGTACAAGAAAAGGAGATCTTCACTGGAAGCAAGTCTCTTTCAATATAAATTCAAATTTGCAGGTTGTTGTCAAAATGAAAAGCAAGCTTATGGCAGGAACATTCACAAAAAAGAAGAAATATATAGTCACAGGCGTTTGCAATGATATCCCAGCTTGGCCTGGAAGAGAGGGGGAAGACATCAATGAAAAGAGGGCATATTTTGGAATAAAAACAACAGACAGGGCAATAGAATTTGAATGTGGAAGTAAAGGAGACAAACAGTTCTGGCTTGAGGGTATCCAGTATATGTTGAATTGCCGTGTCAAAGTAACATTATGA 1278 0.4499 MARETVKTAQTMSPRASNSKCSVHELENIDENAPADWTASSCPPPDTPTESMEFLARSWSLSAMELSKALHSTNITISTGIEMPLSCPSGPQFDTKSSAASKDLSNGCYPPISPRDSSEKKDLLLLHQALSTELLSSQNLLRNGLYRSLLRGRTMGRWLKDQKERKKQEIRTHNAHLHAAVSVAGVAAAIAAVAASTASPELPYANHKNPPPLASAAIASAAALVASHCIEIAEDMGAEHDQILTVVNSAINAKSNGDIMTLTAGAATALRGAATLKARLQKGPGATAIPLVEEKCDESREANILTALDHVFKGGDLLKRTRKGDLHWKQVSFNINSNLQVVVKMKSKLMAGTFTKKKKYIVTGVCNDIPAWPGREGEDINEKRAYFGIKTTDRAIEFECGSKGDKQFWLEGIQYMLNCRVKVTL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00954 425 Pfam Auxin canalisation 45 289 IPR008546 -
Spst9g00954 425 MobiDBLite consensus disorder prediction 1 22 - -
Spst9g00954 425 PANTHER EXPRESSED PROTEIN 36 420 IPR040269 -
Spst9g00954 425 MobiDBLite consensus disorder prediction 88 104 - -
Spst9g00954 425 SUPERFAMILY PH domain-like 310 419 - -
Spst9g00954 425 MobiDBLite consensus disorder prediction 88 114 - -
Spst9g00954 425 MobiDBLite consensus disorder prediction 32 51 - -
Spst9g00954 425 Pfam Plant pleckstrin homology-like region 316 419 IPR013666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00954 Spst-Chr9 8449345 8453307 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00954 - - gmx:100814154 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00954 9 8449345 8453307 Spst9g00954 9 8449345 8453307 ECH