Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00947 ATGGCATCTATTCGAAGAACCTTGTCCCCGGTTGCTAGAGCTGGAACTGTAGCAAATGTGGAAGTCTGTTCAGTAGCTTCTCCATTGTGTAAGTCATCGTCGAGTCCTCAGAACTTCTCACCTTCAGTTGGATTGGACTATCGTGCTTTTGTGTTTGGTGCTTTCTCGCCGAGGTGTTTCAGGGGTTTTGAGAGATCAAAGCCAAGGGGCCAGCTTTGGAGGAAGGTGCTTTTCCATTTTTTCATTTGTTTCATGGTTGGTATTTCCATTGGACTCATTCCACTTGCATCAACACACATGTCAATAAATCTCATGCCAAAACATCGAGCCTTCTCCTTCGAGGTAATATCTGCAGTGGGGAATTTCCAGAAGCTTGAAAATGCAGCGTTAAATGTGACACCATCAACCAATGAGGCTGTGAATTTTAATGCTTCTTTGTATGTAGCTGTGAAAGAACCAGATCTAATAGATGGAGAGTCATATAATATATCCAATAGCCAAATCAGTGAACATTCATATGTGGAGTCTCAAAAGCTTCTCATAATTGTCACTCCAACATACAATCATCTATTTCAAGCATATTACTTGCACCGCTTGTCACAAACTTTAAAACTGGTCTCACCTCCCTTGTTGTGGATTGTTATTGAGGTGACTTCCCAATCTGAAGAAACTGCTGACATCTTAAGGAGTAGTGGGGTTATGTACAGGCATCTAATTTGTACAGCGAATATAACCAACCCAAGCCATAGGAGCATTTTTCAAAGAAATGTTGCAATGGCTCATATCGAAACCCATCGTCTTGATGGGATTGTTTACTTTGCAGATGATGATAACATCTACTCAGTGGAGCTCTTTCAGCAAATGCGAGAAATAAGGCGATTTGGAACATGGACTGTGGCAAGATTAACGGGGGATAAAAGTAGTATTGTCTTGCAAGGACCCATCTGTAATGGAAGTCAAGTAATTGGATGGCATACATATGAGTCAAATGGGAAATCTAAAAGATTTCATGCTGAAATGCCGGGTTTTGCCTTCAATAGCACAATACTCTGGGATCCAAAGAAGTGGCATCGTCCCACTCTGGAACCTATCAGGCAACTTGACACAGTCAAGGAAAGTTTGTGGGTCAGCACATTAATTGAGCAGTTGATTGAAGATGAAAGTCAAATGGAAGGTTTAATGGACAACTGCTCGAGTGTTATGGTCTGGCATATTGATCTCGAAGCATCTTATTCGTCCTATCCGCAAAAAAGGACTGTAAAGAACAACCTGGATGCCATTTTGCAGCTTCCAATTGTGTGA 1302 0.4155 MASIRRTLSPVARAGTVANVEVCSVASPLCKSSSSPQNFSPSVGLDYRAFVFGAFSPRCFRGFERSKPRGQLWRKVLFHFFICFMVGISIGLIPLASTHMSINLMPKHRAFSFEVISAVGNFQKLENAALNVTPSTNEAVNFNASLYVAVKEPDLIDGESYNISNSQISEHSYVESQKLLIIVTPTYNHLFQAYYLHRLSQTLKLVSPPLLWIVIEVTSQSEETADILRSSGVMYRHLICTANITNPSHRSIFQRNVAMAHIETHRLDGIVYFADDDNIYSVELFQQMREIRRFGTWTVARLTGDKSSIVLQGPICNGSQVIGWHTYESNGKSKRFHAEMPGFAFNSTILWDPKKWHRPTLEPIRQLDTVKESLWVSTLIEQLIEDESQMEGLMDNCSSVMVWHIDLEASYSSYPQKRTVKNNLDAILQLPIV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00947 433 FunFam Glycosyltransferases 179 421 - -
Spst9g00947 433 CDD GlcAT-I 178 409 IPR005027 GO:0015018|GO:0016020
Spst9g00947 433 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 179 428 IPR029044 -
Spst9g00947 433 Pfam Glycosyltransferase family 43 199 408 IPR005027 GO:0015018|GO:0016020
Spst9g00947 433 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 71 425 IPR005027 GO:0015018|GO:0016020
Spst9g00947 433 SUPERFAMILY Nucleotide-diphospho-sugar transferases 179 423 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00947 Spst-Chr9 8377030 8379416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00947 1 430 Glycosyltransferase AT1G27600 45.116 8.11e-120 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00947 K20869 - gmx:100808765 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00947 9 8377030 8379416 Spst9g00947 9 8377030 8379416 ECH