Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00907 ATGGGGATAGCAGATGCATGCTCCAGGTTCCTTGGGGACTTTTTACAAGCATTCAAATGCTCCCCACAGAGCTCAGTGTCTTCTCACCTTGATCACAATCGTCATGCATGCAAGCCTGAGAAGATGGTGAAACTTGATGCCAAGATGGTCAGTGCCCTTGTCACTGTTTTTGGCATGGAAGCCAATGGAAGAATCAGGAAGGAAAGTGCAAGGGAAGTGGTGGAGAAGCTTGGTTTGATGTATGAGAAGGCCTCGTCAGGGTTTGAGCTAGGTGAGGGTGGGTTGATGGATGATGAAGTGCCTGTGGAAGAGGTGCTTGGTGAGTTGGAGGACATGTCAAAGCGCAGTGAGTTATTGCATGAGGCCTTCAAAATCTTTGATGAGGATGGAGATGGATACATAGATGCAATGGAGTTGAAGAGGGTGCTTGATTGCTTGGGTTTGGACAAGGGTTGGGATATGAAGGCCATTGAAAAGATGGTGAAAGTTGCAGATTTGAACTTTGATGGCAAGGTTGATTTTGGTGAGTTTGAATTGATGATGGGGTAG 549 0.4663 MGIADACSRFLGDFLQAFKCSPQSSVSSHLDHNRHACKPEKMVKLDAKMVSALVTVFGMEANGRIRKESAREVVEKLGLMYEKASSGFELGEGGLMDDEVPVEEVLGELEDMSKRSELLHEAFKIFDEDGDGYIDAMELKRVLDCLGLDKGWDMKAIEKMVKVADLNFDGKVDFGEFELMMG 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00907 182 Gene3D - 19 182 - -
Spst9g00907 182 SUPERFAMILY EF-hand 107 181 IPR011992 -
Spst9g00907 182 ProSiteProfiles EF-hand calcium-binding domain profile. 114 149 IPR002048 GO:0005509
Spst9g00907 182 SMART efh_1 156 182 IPR002048 GO:0005509
Spst9g00907 182 SMART efh_1 118 146 IPR002048 GO:0005509
Spst9g00907 182 CDD EFh 119 177 IPR002048 GO:0005509
Spst9g00907 182 PANTHER CALCIUM BINDING PROTEIN 113 181 - -
Spst9g00907 182 FunFam Calmodulin A 104 182 - -
Spst9g00907 182 ProSitePatterns EF-hand calcium-binding domain. 127 139 IPR018247 -
Spst9g00907 182 Pfam EF-hand domain pair 118 181 IPR002048 GO:0005509
Spst9g00907 182 ProSiteProfiles EF-hand calcium-binding domain profile. 152 182 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00907 Spst-Chr9 7928891 7929439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00907 45 181 EF-hand Containing Proteins AT4G20780 35.220 2.88e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00907 - - gmx:100527700 294.664