Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00898 ATGAAGCCCTCCACAGAATTAAACAGCGCCATCATCATCGACGTTGATTCCTCCAGCAGAAGCCCATCAATCCTCGAAAACCACCCAAATCAACAAAAACTCAAACACCTCAACGTTCCCTTGCTCCTCCAACAACCATCTTATGCCACACACGAATTTGGAAACATTCACACAAGCCTTCAATGCTGTGCTCTCGACCACTCTTCTCTCCTCACAAAACTCTTTTCCTACTTCGCTTTCATATTCCTCACCTTTACAGTCCCTCTCTTCACTTCTCTCTTCGTACATATCCCTGCTTCCCAACTCGACCCCTTTAGCTTCAATAAGCTCCTCCAACTACCACAATCAGCCCTCGCGATTGTCGCCTTCTTCACCCTCTCTCCGTTCTTCCCAAGTTATGGCCTCAGGCAGCTTCTGTTCCCAGACGTATTACAAGATGACTCCTTTTATGTTCGACGCGGGGTGGAAATTTCTGTCCCATGTGGGACCCTCCTCAACTGGGTTGTGTTTGTTTTAGTGTTGCTTTCCTGGGTCTACAGAACTGGGTTGTTCTTGTTGGCGTGTGTGCTCTTTAGGCTTACCTGCGAGCTTCAGATACTGAGGTTTGAAGGACTTCATAAGCTCTTTGAAGGGTGTGAATCTGATGCAAACACCATATTCAGAGAACATGTCAGAATCAAGAGGCAATTGTGGATAACAAGCCATAGGTACAGGTTCTTTATAATTAGTTGTTTGGTGACCATCACGGTTGGTCAATTGACTTCTCTCTTGCTGGTTTTGGAATCCAAATCTGACACTACCTTCTTCAATTCTGGTGACCTTGTGATTTGTTCTGCTGTGCAGTTGTGTGGATTTGCCTTGTGCCTTATGGGTGCTGCCAGAATCACACACAGGGCTCAAGGTATAGTGTCAATTGCCGCAAAGTGGCACATGGTGGCGACCAATGCATCTACTGAATCAGAGCAATGGAAAGGCCAAATGGCAGAGGGATTACACAGTCCTACTGCCAGTGATTCTGATTCATCAGAAATACAGATTTCAGTAACCCCATCACCTTCTTTTTTCCATAACAGACAAGCTTTAGTGACATATTTGGAGCATAACTATGGAGGGATAACACTATTTGGATTTGTACTTGATCGAGGATTAATTCACACTCTCTTCGCGTTTGAGTTCTCTATGGTGCTTTGGATTCTGAAAATCATGGTTTTCTGGGTTTTTGGCTATGGTTCACTGGTGTGGAACCCAGGGTTCGATTACGATGAGAAGATTATTGGTTTCATTAAGGATTACAGACGCGTGTTTGATTTAGCGTGCATTGATCACAGGGGAACACCAGAAAACCCAGCAAGAACTTGCACATTGGAGGAGAAGGAAGGGAGTATTTGCTGGGGAGCTGCTTATTGTGTTCGAGGAGGTCCTGAAAAGGAAAAACTGGCTATGCAGTATTTGGAGCGACGTGAATGTGAATATGACCGAAAAACTCTTGTAACCTTCTTCAAGGAAGGAGATTCACAGCACCCTGCTTTAACTGACGTAATTGTATTCACATCAACTCCAGACAAAGTGAACAACAAATACTACCTGGGGCCTGCCCCATTGGAAGACATGGCGAGGCAAATAGCAACTGCCTATGGTCCTTGTGGAAACAACAGGGACTATCTTTTCCTTCTAGAAAAGGCCATGTATGATATTGGCCATGAGGATGACTTGGTGATAGAACTTGCAAATGAGGTGAGGAAAGTACTTGGAATAGGAAATGTACTACCAAATGTTGTAGCAGCCCAACTTCCACACCCTCCTCATGTGTCCATTCCTACACGTCAACTGCAGCCACTGCCAGAACCTATTGCTTTGGATGGTTCAGTTTTGAGGGGCTGGAGATGA 1887 0.4505 MKPSTELNSAIIIDVDSSSRSPSILENHPNQQKLKHLNVPLLLQQPSYATHEFGNIHTSLQCCALDHSSLLTKLFSYFAFIFLTFTVPLFTSLFVHIPASQLDPFSFNKLLQLPQSALAIVAFFTLSPFFPSYGLRQLLFPDVLQDDSFYVRRGVEISVPCGTLLNWVVFVLVLLSWVYRTGLFLLACVLFRLTCELQILRFEGLHKLFEGCESDANTIFREHVRIKRQLWITSHRYRFFIISCLVTITVGQLTSLLLVLESKSDTTFFNSGDLVICSAVQLCGFALCLMGAARITHRAQGIVSIAAKWHMVATNASTESEQWKGQMAEGLHSPTASDSDSSEIQISVTPSPSFFHNRQALVTYLEHNYGGITLFGFVLDRGLIHTLFAFEFSMVLWILKIMVFWVFGYGSLVWNPGFDYDEKIIGFIKDYRRVFDLACIDHRGTPENPARTCTLEEKEGSICWGAAYCVRGGPEKEKLAMQYLERRECEYDRKTLVTFFKEGDSQHPALTDVIVFTSTPDKVNNKYYLGPAPLEDMARQIATAYGPCGNNRDYLFLLEKAMYDIGHEDDLVIELANEVRKVLGIGNVLPNVVAAQLPHPPHVSIPTRQLQPLPEPIALDGSVLRGWR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00898 628 Pfam ChaC-like protein 405 581 IPR006840 GO:0006751|GO:0061928
Spst9g00898 628 ProSitePatterns Glycosyl hydrolases family 5 signature. 571 580 IPR018087 GO:0004553|GO:0005975
Spst9g00898 628 Gene3D - 402 570 - -
Spst9g00898 628 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 24 154 IPR021924 -
Spst9g00898 628 Pfam Protein of unknown function (DUF3537) 162 390 IPR021924 -
Spst9g00898 628 Pfam Protein of unknown function (DUF3537) 52 154 IPR021924 -
Spst9g00898 628 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 402 511 IPR036568 -
Spst9g00898 628 FunFam Gamma-glutamylcyclotransferase 403 586 - -
Spst9g00898 628 CDD GGCT_like 406 511 IPR013024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00898 Spst-Chr9 7874399 7881894 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00898 - - gmx:100804399 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00898 9 7874399 7881894 Spst9g00898 9 7874399 7881894 ECH