Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00895 ATGATGATCATCAAAACCATATGCATGGGGTTTAGAGAGAGAGTACGTCTTGCTCGCATCCCACTCTCCAAGTTTTCTTCAGACAGCTATGATATAAGACCTACTATAAGAGCTAAAGTTCAAGATCTCAAGAAAGCTACACAAAAGAGACGACAACTGTTATATCGAGCTCCTATGGCAGGGTTAAATTTTGAAGTCACATATACTGACAACCATGATATTCTGAAGATATTTGAAGCTGAAGGTGTTGAGTTCCTTTTATCTTCTGAAGGGAAGGTACCTGCGTCAGAATGCAATGGGAAAGTCATCTGCCTATTTTTCAGTGCAAACTGGTGCAGGCCTTGCAGAGCTTTCACTCCCCATCTTCTTGAACTGTATGAAACACTGAGAAAGAGGGGAATAAGTTTAGAGATAATCTTCATCTCCTTTGACCGTGATGGGGATGGATTTAAAGAACACTTCAAGAGCATGCCATGGCTAGCTGTCCCATTTGACGTAAATTTGCACAGAAGACTGATTGACAGATACAGAGTTGATCGAATCCCATCATTCATTCCATTATGTTCAGATGCCATAACTATCGAAGAGGACTTGATTGGGTGCATTGAGGATTACGGTGCCGATGCATTTCCTTTCACAAGGAAGAGACACGAGGAATTGAAAGCCATGGACAAAAGGAAGAGTGAGGAAGCAAGCTTCGAAGAACTACTGGGACATGTAGGACGCAACTTTCTCATCTCTGGAGATGATAGAAAGGTGCCCATTTCTGAAGTAGCTGGTAAGACCATAGGCCTGTATTTTTGTGCTTATTGGTCTCCTCCTTGCTGTGCCTTCACTGTCCAACTTACAGATGCATACAACAATCTCAAGGCTGCAAAAGGGGAATGCTTTGAGATTGTTCTAATATCAACAGATAGGGACCTTGATGAATTCAATGTTAACAGAAGTAGTATGCCATGGCTTGCTGTTCCATATGAGGACAGAACAAGGCATGACCTTAGAAGAATCTTTAATATAAAGGGAATTCCTGCTTTGGTTCTCATTGGACCAGATGGCAAAGTCGTTAGTGTGAATGGCAAGTTCATGATCTCCTCATATGGTGCAGAAGCTTTCCCATTTACCGAATCACGGATAAGAGACCTAGAAGCAGCTCTCAGAAAGGAAGGAGAGGCTTTGCCTCAGCAGGTTGAGGATGTCAAGCATGAACATGTGCTGAAATTGGATATGGCCAAAGCATATGTATGTGATTCCTGTAGAAAGCAAGGGAAGTTCTGGACGTTCTCTTGTGATGTATGTGACTATGACCTACACCCAAGTTGTCTAGAAAAAGCCAACTAG 1338 0.4238 MMIIKTICMGFRERVRLARIPLSKFSSDSYDIRPTIRAKVQDLKKATQKRRQLLYRAPMAGLNFEVTYTDNHDILKIFEAEGVEFLLSSEGKVPASECNGKVICLFFSANWCRPCRAFTPHLLELYETLRKRGISLEIIFISFDRDGDGFKEHFKSMPWLAVPFDVNLHRRLIDRYRVDRIPSFIPLCSDAITIEEDLIGCIEDYGADAFPFTRKRHEELKAMDKRKSEEASFEELLGHVGRNFLISGDDRKVPISEVAGKTIGLYFCAYWSPPCCAFTVQLTDAYNNLKAAKGECFEIVLISTDRDLDEFNVNRSSMPWLAVPYEDRTRHDLRRIFNIKGIPALVLIGPDGKVVSVNGKFMISSYGAEAFPFTESRIRDLEAALRKEGEALPQQVEDVKHEHVLKLDMAKAYVCDSCRKQGKFWTFSCDVCDYDLHPSCLEKAN 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00895 445 CDD TryX_like_TryX_NRX 243 373 IPR045870 GO:0004791
Spst9g00895 445 Gene3D Glutaredoxin 78 216 - -
Spst9g00895 445 SUPERFAMILY Thioredoxin-like 246 356 IPR036249 -
Spst9g00895 445 ProSiteProfiles Thioredoxin domain profile. 235 383 IPR013766 -
Spst9g00895 445 ProSiteProfiles Thioredoxin domain profile. 74 228 IPR013766 -
Spst9g00895 445 SUPERFAMILY Thioredoxin-like 89 187 IPR036249 -
Spst9g00895 445 PANTHER THIOREDOXIN 65 393 - -
Spst9g00895 445 Pfam Thioredoxin-like 260 354 IPR012336 -
Spst9g00895 445 Pfam Thioredoxin-like 100 185 IPR012336 -
Spst9g00895 445 Gene3D Glutaredoxin 239 375 - -
Spst9g00895 445 Pfam C1 domain 400 440 IPR004146 -
Spst9g00895 445 SUPERFAMILY Cysteine-rich domain 392 441 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00895 Spst-Chr9 7851882 7854069 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00895 K17609 - gmx:100778160 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00895 9 7851882 7854069 Spst9g00895 9 7851882 7854069 ECH