Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00890 ATGGCTCCGAGGTTGGACTTTTCCAATTGGTGGACCAAGGACGCACAGAAGGGAACACCAGTGGTGGTGAAAATGGAGAACCCCACTTTCTCTGTTGTGGAGATCAATGGTGCAGATGCTGCATTCAGGCCAGTGGAGAAAAGCCGTGGCAAGAATGCTAAGCAAGTCACCTGGGTGTTGCTTCTCAGGGCTCACCGTGCTGTTGGCTGTGTCACTTGGCTTGCGACTGTGCTTTGGGCGTTGCTGGGGGCCATTAAGAAGAGGTTGATTCATGGACGAGGTGTGGTTATGGAGAGTGAGAGTGACAAGTTGGAAAAAGGCAAGTTGCTGTTTAAAATCATTAGAGTGTTCCTAGTGACTTCCTTGGCAGTTCTGGCCTTTGAGGTTGTTGCTTACCTTCAAGGTTGGCATTTTGGAAACCCCACTTTGCACATTCCTCGTACTTCTGATTTGGAAGGATTCCTCCACTTGGCTTATGTTGCTTGGTTGACGTTTCGTGCCGAGTACATTGCTCCTGCTATACAGGCACTTTCCAAATTTTGTGTTGTTTTGTTTCTTATCCAGTCTGTGGATCGCATGCTCCTTTGCTTGGGGTGCTTTTGGATCAAATACAGGAAGGTAAAGCCAAAGATTGATGGGGATCCGTTCAAGAGTGATGACGTTGAAGGATCTGCAAACAATTATCCCATGGTTCTGGTTCAAATTCCAATGTGCAATGAGAAGGAGGTGTATGACCAATCCATCTCTGCAGTATGTGGCATTGATTGGCCAAGGGATCGTTTACTGATTCAAGTACTTGATGATTCTGATGATGAGAGCATACAGTGGTTAATTAAGGCAGAGGTCTCTAAATGGAGCCAAAAGGGAATCAATATAGTCTATAGGCATCGCTTAGTAAGGACTGGATATAAAGCTGGAAATCTTAACTCAGCAATGAGCTGTGACTATGTGAAAGACTACGAGTTTGTTGCAATTTTCGATGCAGACTTTCAACCAAATCCTGATTTTCTTAAGCGAACTGTGCCACATTTCAAGGACAATCCCGAACTAGGTTTGGTCCAAGCTAGATGGTCTTTTGTGAACAAGGATGAGAATTTGTTGACTCGTCTCCAAAACATAAACTTATGCTTCCATTTTGAGGTAGAACAGCAGGTGAATGGGGTATTTCTCAATTTTTTTGGTTTCAATGGAACTGCTGGTGTTTGGAGAATCAAGGCCCTGGAAGAGTCCGGGGGCTGGCTAGAGAGGACAACTGTAGAAGATATGGACATTGCTGTTCGAGCTCATCTCAATGGTTGGAAATTTATCTTTCTAAATGATGTAAAGACTAGTATTCTTGTATATGCATATCATGACTATTTATATGTTCACCTCAAATCCCTGGAGTTCTCTCAAGAATTTGTTAAATCTGTCAATTTTCAGGTACCCTGTGAAATTCCTGAGTCATATGAAGCTTACAGGAAGCAGCAACACCGCTGGCATTCAGGTCCTATGCAACTTTTTAGGTTGTGTCTTCCAGCAATTGTCAAATCTAAGGTGTCTGCATGGAAGAAAGCAAACTTAATCCTGCTATTTTTTCTGTTGAGGAAACTGATCCTTCCTTTTTACTCCTTCACCTTATTTTGCATAATTCTTCCTCTAACCATGTTTGTACCAGAGGCAGAGCTTCCTTTGTGGGTGATCTGCTATGTACCTGTATTTATGTCACTCCTTAACATTCTTCCTGCTCCAAAATCTTTTCCTTTCATTGTTCCCTACCTACTTTTCGAAAACACCATGTCCGTCACCAAATTCAATGCAATGGTATCTGGTCTTTTCCAATTAGGCAGCTCTTATGAATGGGTTGTCACAAAGAAAGCTGGCAGATCATCAGAGTCTGATTTACTGGCTGCTGAAGAAAGGGAAACCAAGTCAATAGAACAACAAAAGATTCATAGAGGAGCTTCCGACAGTGACCTTATTGAGCCACAAAAGTTTATGGAGCACAAAGAAGCAGCTCCAACAACTGTTAAGAAAACTAATAAGATATATAAGAAAGAGCTAACTCTGGCCTTCCTCCTTCTCACAGCTTCTGTCAGGAGTCTGTTATCTGCACAAGGAGTTCACTTCTACTTTCTACTTTTCCAAGGAGTGACCTTCCTCCTTGTGGGGCTTGATTTGATTGGAGAGCAAATGAGTTAG 2181 0.4278 MAPRLDFSNWWTKDAQKGTPVVVKMENPTFSVVEINGADAAFRPVEKSRGKNAKQVTWVLLLRAHRAVGCVTWLATVLWALLGAIKKRLIHGRGVVMESESDKLEKGKLLFKIIRVFLVTSLAVLAFEVVAYLQGWHFGNPTLHIPRTSDLEGFLHLAYVAWLTFRAEYIAPAIQALSKFCVVLFLIQSVDRMLLCLGCFWIKYRKVKPKIDGDPFKSDDVEGSANNYPMVLVQIPMCNEKEVYDQSISAVCGIDWPRDRLLIQVLDDSDDESIQWLIKAEVSKWSQKGINIVYRHRLVRTGYKAGNLNSAMSCDYVKDYEFVAIFDADFQPNPDFLKRTVPHFKDNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKTSILVYAYHDYLYVHLKSLEFSQEFVKSVNFQVPCEIPESYEAYRKQQHRWHSGPMQLFRLCLPAIVKSKVSAWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPLWVICYVPVFMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKAGRSSESDLLAAEERETKSIEQQKIHRGASDSDLIEPQKFMEHKEAAPTTVKKTNKIYKKELTLAFLLLTASVRSLLSAQGVHFYFLLFQGVTFLLVGLDLIGEQMS 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00890 726 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 221 445 IPR029044 -
Spst9g00890 726 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 541 IPR029044 -
Spst9g00890 726 Pfam Glycosyl transferase family group 2 323 561 IPR001173 -
Spst9g00890 726 FunFam probable xyloglucan glycosyltransferase 5 222 447 - -
Spst9g00890 726 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 159 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00890 Spst-Chr9 7806597 7809517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00890 1 726 Miscellaneous Gene Families AT4G31590 75.650 0.0 1111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00890 - - gmx:100790397 1305.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00890 9 7806597 7809517 Spst9g00890 9 7806597 7809517 ECH