Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00880 ATGGCAACAAAAACAAGAGACTCGAGTGTGGTGGGAAAGGAGAAGAAGGTTTCATCTTCAAATTCTGCGACAACAAGTACCAAAAAGACCCTAACCAAGCCATCCTCAACGAACAAGGCCACCTCAAATCAATCAACAGATAAACAAATCCCTAACTATCTGAAGCCCACATTAAGCTCAATACGCCTTGAAACCCACTCCTCCTTCAAGCTTCCTAAGAATGATCCTCCCACCAAACCCACCCTAAATCGAAGAAGATCTTTGGACCCATCATCATCATCTTCAAGGGTACCCAAACAAGCATATTCATCATCTGTTTCAAGACAACATAAGGCCCTTGTGTCCCCTGGTCCACGGGAAAGGTCCCTACCATTTCGAGCTTCGAGTGCGCCAAGTAAAACTACTCTTAACCCATCAAAACCCGTTCCAGAGAGGCTTTCAAAGACCCCAGTAGGAGGAAGAACTCAATCACTAAGTGGGAAGACGGTTAAGAAGAGCAACAATAACGTTTCTACTTCAAATCCTAAAAAGGTAATAACTCGTCATGCTTCTGTTGACTCAAATAACATTTCAGAGAGTAGCAATACTTCTGAAACAGAAGATAAAGAACCTGTAAATGAAGTGGTTGAAGAAGTGGAAAAAGTGGAGAATCTAGAAGAACTCACACATCAAGTCATTGACTCTGAACATGAAAATGAAAATGAAAATGAGCATGATCATGATCATGGAAAGCAAGGAAAAGAACATGAACATGATCCTAAAGAGAATGAGGATGATCATGATAATGAAAAATATGAGAAAAAGCATGATCATGAAGAGTGTAAGCAAAAGCTTGAGGAAACTGATCACCCTCATGTTCAGGAGGATGGTGAGAAGGATATTCCTAATGTCTTAGAAGAAGACCAACTAAAAGAGAATGATAATACAAACCAAGATGAATGCAACATTGAAGAGAGTCATTCAGAAAATGATAATACAAATCAAGATGAATGTAACATTAGAGAGAGTCATACAGAAAATGATAATATAAAGCAAGATGAATGTAACATAAAAGAGAGTAATTCAGAAACTGATAATGCAAACCAAGATGAATGCAACATTAAAGAGAGTCATTCAGAAGTTGGTCATGCAACAATTGATGAAGTTGAGGTCAAAGAAGAAGAACGGGAACAAAAACAAGGACAAGAAAAAGAAGAAGGTGAGGTTGTAATAGAAGATTATGAAACTGAGACCAACAATGAAAAAGAGGCCGTGGACGAGAAAAAAGGAGTTGAAGAAGAAGGAACAAGTGAAGAGATTAAAGAATCAAGGGAAGGAGAAGATAAACAAGAAGATAAACAAGTAGAGAGTGAATTTGAAGATGAAAAAGTTGAGCTAATAAAGCAAGTACAAGCAAGTGATGAGGTGCAAGGACAGAAAGAGGCTCACACTTCAGTATTCAACGATGCCATTGAAGAGAATACGAACAAGCTATTGGAAGACAGGAGGAATAGAGTAAGAGCATTAGCTGGAGCATTTCAAAATGTCATTGACCATCAAAAAACCAAGTGA 1551 0.3836 MATKTRDSSVVGKEKKVSSSNSATTSTKKTLTKPSSTNKATSNQSTDKQIPNYLKPTLSSIRLETHSSFKLPKNDPPTKPTLNRRRSLDPSSSSSRVPKQAYSSSVSRQHKALVSPGPRERSLPFRASSAPSKTTLNPSKPVPERLSKTPVGGRTQSLSGKTVKKSNNNVSTSNPKKVITRHASVDSNNISESSNTSETEDKEPVNEVVEEVEKVENLEELTHQVIDSEHENENENEHDHDHGKQGKEHEHDPKENEDDHDNEKYEKKHDHEECKQKLEETDHPHVQEDGEKDIPNVLEEDQLKENDNTNQDECNIEESHSENDNTNQDECNIRESHTENDNIKQDECNIKESNSETDNANQDECNIKESHSEVGHATIDEVEVKEEEREQKQGQEKEEGEVVIEDYETETNNEKEAVDEKKGVEEEGTSEEIKESREGEDKQEDKQVESEFEDEKVELIKQVQASDEVQGQKEAHTSVFNDAIEENTNKLLEDRRNRVRALAGAFQNVIDHQKTK 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00880 516 MobiDBLite consensus disorder prediction 362 400 - -
Spst9g00880 516 Coils Coil 343 363 - -
Spst9g00880 516 Coils Coil 407 427 - -
Spst9g00880 516 Coils Coil 218 238 - -
Spst9g00880 516 SMART CaM_binding_2 393 511 IPR012417 GO:0005516
Spst9g00880 516 MobiDBLite consensus disorder prediction 127 142 - -
Spst9g00880 516 Pfam Plant calmodulin-binding domain 397 510 IPR012417 GO:0005516
Spst9g00880 516 MobiDBLite consensus disorder prediction 408 454 - -
Spst9g00880 516 MobiDBLite consensus disorder prediction 14 74 - -
Spst9g00880 516 MobiDBLite consensus disorder prediction 1 454 - -
Spst9g00880 516 MobiDBLite consensus disorder prediction 84 111 - -
Spst9g00880 516 PANTHER EMB|CAB62594.1 10 516 - -
Spst9g00880 516 MobiDBLite consensus disorder prediction 196 353 - -
Spst9g00880 516 MobiDBLite consensus disorder prediction 150 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00880 Spst-Chr9 7701627 7703177 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00880 - - pvu:PHAVU_009G101300g 393.66